Table 1. OLYP-D3(BJ) Calculated Geometrical, Energetic, and Net Spin Properties of the Optimized DNC Clusters in Fea3HS,3+–OH––CuB, Fea3HS,3+–H2O···OH––CuB, Fea3HS,3+–OH–···H2O–CuB, and Fea3HS,3+–H2O–CuB Statesa.
geometry
(Å) |
net spinf |
|||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
structureb | Fe–N(H384) | Fe–O | Cu–O | O···O | Fe···Cu | Ec | Qd | pKa(H2O)e | Fea3 | O(Fe)/O(Cu) | CuB | Y237 |
Fea3HS,3+–OH––CuB | 2.50 | 1.99 | 2.04 | 3.73 | 0.0 | 0 | 4.08 | 0.12 | –0.39 | –0.25 | ||
Fea3HS,3+–H2O···OH––CuB | 2.18 | 2.17 | 1.95 | 2.50 | 4.78 | 6.3 | 0 | 4.08 | 0.08/–0.16 | –0.50 | 0.11 | |
Fea3HS,3+–OH–···H2O–CuB | 2.28 | 1.98 | 2.13 | 2.45 | 4.64 | 6.6 | 0 | 4.12 | 0.20/–0.03 | –0.39 | –0.36 | |
Fea3HS,3+–H2O–CuB(a) | 2.11 | 2.39 | 2.94 | 4.98 | –1.5 | 1 | 12.1 | 4.11 | 0.04 | –0.24 | –0.62 | |
Fea3HS,3+–H2O–CuB(b) | 2.12 | 2.47 | 2.77 | 4.90 | –1.6 | 1 | 12.2 | 4.10 | 0.04 | –0.25 | –0.61 | |
Fea3HS,3+–H2O–CuB(c) | 2.06 | 3.55 | 2.21 | 4.73 | –1.2 | 1 | 11.9 | 4.06 | –0.01 | –0.36 | –0.36 | |
Fea3HS,3+–H2O–CuB(d) | 2.09 | 3.26 | 2.20 | 4.73 | –0.9 | 1 | 11.7 | 4.09 | –0.02 | –0.35 | –0.44 | |
3S8Gg | 2.22 | 2.39 | 2.25 | 1.52 | 4.92 |
Geometries were optimized in the broken-symmetry state with high-spin (HS) Fea33+ AF-coupled to the CuB site.
Calculated broken-symmetry state energies (offset by −26336.6 kcal mol–1).
The net charge of the model clusters.
The pKa(H2O) values were calculated for the process Fea3HS,3+–OH––CuB → Fea3HS,3+–H2O–CuB(a–d).
The Mulliken net spin populations on Fea33+, O of the bridging OH–/H2O, CuB, and the heavy atoms of the Tyr237–O– side chain (the sum total).
The X-ray crystal structure.37