Table 6.
Molecular docking value of compounds isolated from root extracts of O. cufodontii.
| Compounds | Affinity (kcal/mol) | H-bond | Residual interactions | |
|---|---|---|---|---|
| Hydrophobic/Pi-Cation | Van dar Waals | |||
| 1 | − 6.3 | Arg-76 | Ile-78 | Asp-73, Glu-50, Ile-94, Asp-49, Ieu-98, Val-120 |
| 2 | − 6.1 | – | Ile-78, Ile-94, Glu-50 | Asp-73, Arg-76, Asn-46, Gly-77, Thr-165, Asp-49, |
| 3 | − 6.9 | Asn-46, Arg-76 | Ile-78, Glu-50 | Asp-43, Ala-47, Gly-77, Pro-79, Val-43, Arg-136, Val-167, Thr-165 |
| 4 | − 6.6 | Asn-46 | Glu-50, Ile-78 | Asp-73, Asp-49, Ala-47, Gly-77, Pro-79, Ile-94, Arg-76, Val-43, Thr-165, Val-167 |
| 5 | − 6.6 | Asp-73 | Arg-76 | Asn-46, Ala-47, Glu-50, gly-77, Ile-78, Pro-79, Thr-165 |
| Ciprofloxacin | − 6.9 | Asp-73, Asn-46, Arg-76 | Ile-78, Ile-94, Glu-50, Gly-77 | Ala-47, Pro-79, Thr-165 |