Table 6.
Chromosome, start and end coordinates, percentage variance explained, and annotated protein-coding genes within for 20 SNP consecutive genomic windows found to be associated with TS in young (parities 1 and 2) Canadian Angus cows
| SNP window2 | ||||
|---|---|---|---|---|
| Chr1 | Start, bp | End, bp | Var3 | Annotated genes |
| 8 | 51,375,774 | 52,189,823 | 1.31 | PCSK5 |
| 20 | 67,952,434 | 68,768,871 | 1.19 | DEPDC1B |
| 5 | 53,259,627 | 54,421,524 | 1.19 | LRRC10, CCT2, FRS2, YEATS4, LYZ1, LYSB, LYZ2, and LYZ3 |
| 6 | 72,614,036 | 73,770,751 | 1.14 | ADGRA3 and GBA3 |
| 4 | 21,671,524 | 22,675,392 | 1.09 | ETV1 and DGKB |
| 17 | 41,712,693 | 42,506,929 | 1.07 | ARFIP1 and FBXW7 |
1Chr, chromosome number.
2Windows with 20 consecutive SNPs based on ARS-UCD1.2.
3Var, percentage of additive GV explained by each SNP window.