Table 1.
Sample ID |
SRA ID |
ST131 clade or ST |
bla CTX-M allele(s) |
Country, year |
Unique AMR contigs |
---|---|---|---|---|---|
8289_1#91 |
ERR191724 |
C1 |
14 |
Ireland, 2007 |
268 |
8289_1#35 |
ERR191668 |
C1 |
14 |
Ireland, 2008 |
270 |
8289_1#3 |
ERR191636 |
C2 |
15 |
Ireland, 2005 |
274 |
8289_1#34 |
ERR191667 |
C2 |
15 |
Ireland, 2010 |
274 |
8289_1#24 |
ERR191657 |
C2 |
14 and 15 |
Ireland, 2009 |
283 |
8289_1#60 |
ERR191693 |
C2 |
15 |
Ireland, 2010 |
262 |
8289_1#27 |
ERR191660 |
C2 |
15 |
Ireland, 2010 |
262 |
SE15 |
A |
none |
Japan, 2010 |
251 |
|
NCTC13441 |
ERS530440 |
C2 |
15 |
UK, 2003 |
280 |
EC958 |
C2 |
15 |
UK, 2005 |
291 |
|
3_2_53FAA |
– |
ST95 |
none |
Canada, 2007 |
269 |
83 972 |
– |
ST73 |
none |
Sweden, 1978 |
213 |