Table 5.
Best fit models for estimating percentage of seeds damaged by Leptoglossus occidentalis, based on the sample of 192 Pinus strobiformis trees.
Variable selection method | Machine learning algorithm | Independent variables | RMSE | MAE | R2 |
---|---|---|---|---|---|
ROC | avNNet | SMRPB, DD5, WINP, Mnppm, KCEC, GSP, Arbutus xalapensis, Juniperus deppeana | 0.199 | 0.162 | 0.122 |
ROC | brnn | SMRPB, DD5, WINP, Mnppm, KCEC, GSP, Arbutus xalapensis, Juniperus deppeana | 0.201 | 0.160 | 0.107 |
KWE | rf | MMAX, FDAY, SMRPB, SPRP, dieback, shootdeath, Slope, Znppm | 0.203 | 0.163 | 0.140 |
KWE | nnet | MMAX, FDAY, SMRPB, SPRP, dieback, shootdeath, Slope, Znppm | 0.203 | 0.164 | 0.076 |
ROC | lm | SMRPB, DD5, WINP, Mnppm, KCEC, GSP, Arbutus xalapensis, Juniperus deppeana | 0.204 | 0.165 | 0.111 |
KWE | mlpWeightDecay | MMAX, FDAY, SMRPB, SPRP, dieback, shoot death, Slope, Znppm | 0.219 | 0.174 | 0.082 |
ROC, Receiver Operating Characteristic; KWE, Kruskal Wallis selected with elevation; avNNet, Model Averaged Neural Network; brnn, Bayesian Regularized Neural Networks; rf, Random Forest; nnet, Neural Network; lm, linear regression; mlpWeightDecay, Multi-Layer Perceptron; RMSE, Root-mean-squared error; MAE, Mean Absolute Error; R2, Determination coefficient; SMRPB, Summer precipitation balance: (jul+aug+sep)/(apr+may+jun); DD5, Degree-days >5 degrees C (based on mean monthly temperature); WINP, Winter precipitation: (nov+dec+jan+feb); Mnppm, manganese concentration in the soil (ppm); KCEC, proportion of potassium in CEC (cation exchange capacity); GSP, Growing season precipitation (April to September); Arbutus xalapensis, frequency of occurrence of Arbutus xalapensis in the neighborhood; Juniperus deppeana, frequency of occurrence of Juniperus deppeana in the neighborhood; MMAX, Mean maximum temperature in the warmest month (degrees C); FDAY, Julian date of the first freezing date of autumn; SPRP, Spring precipitation: (apr+may), dieback, Cronartium ribicola damage measurement; shoot death, Cronartium ribicola damage measurement; Slope, slope position (%); Znppm, zinc concentration in the soil (ppm).