. 2021 Apr 29;12:642065. doi: 10.3389/fgene.2021.642065

TABLE 2.

Average (SD) number of true positive (TP) and false positive (FP) SNPs for all the simulated populations¹.

Population	Association	SSA_NoCor	EMMAX	ssGWAS	GBLUP-GWAS
Small populations
Fish	TP	85.20(0.47)^a	20.00(0.31)^b	20.60(0.35)^b	20.00(0.31)^b
	FP	253.6(2.50)^a	3.80(1.01)^b	5.20(1.18)^b	2.80(0.96)^b
Beef	TP	15.80(0.68)^a	5.60(0.73)^a	7.60(0.50)^a	5.60(0.73)^a
	FP	68.60 (0.78)	0.00	0.20 (2.24)	0.00
Dairy	TP	13.40(0.20)^a	8.60(0.60)^a	12.60(0.12)^a	9.00(0.55)^a
	FP	24.20 (0.32)	0.00	0.20 (2.24)	0.20 (2.24)
Large populations
Fish	TP	321.40(72.52)^a	106.20(25.41)^b	133.80(37.93)^b	104.20(25.33)^b
	FP	1068 (241.67)	0.00	0.00	0.00
Beef	TP	24.60(3.29)^a	17.20(5.54)^a	21.00(5.34)^a	17.00(5.48)^a
	FP	4.40(2.19)^a	0.40(0.55)^b	0.20(0.45)^b	0.40(0.55)^b
Dairy	TP	151.60(5.98)^a	55.20(3.7)^b	61.60(8.65)^b	52.40(5.94)^b
	FP	853.80 (39.32)	0.00	0.00	0.00

¹Statistical differences were not calculated when the SD of at least one method within a group was null. The superscripts within a row, group the results that did not differ significantly.