Table 3. RADD sequential reaction conditions.
Lesion processing mix |
100 μL total reaction volume |
Gap filling mix | 100 μL total reaction volume |
---|---|---|---|
UDG (NEB M0280s) | 2.5 U | Klenow exo- (Thermo Fisher EP0422) | 5 U |
FPG (NEB M0240L) | 4 U | Digoxigenin dUTP (Sigma Aldrich 11573152910) | 1 μM |
T4PDG (NEB M0308S) | 5 U | Therm Pol buffer (NEB B9004S) | 10 μL |
EndoIV (NEB M0304L) | 5 U | ||
hAAG (NEBM0313S) | 5 U | ||
NAD+ (100x, NEB B9007S) | 500 μM | ||
BSA (Sigma Aldrich) | 200 μg/mL | ||
Therm Pol buffer (NEB B9004S) | 10 μL |