Figure 2.

Expression of different markers in all clusters. (A) Heatmap of the mean fluorescence intensity (MFI) for each marker in all identified clusters. Cumulative data of all patients and time points (n=20). (B) Heatmap representation of 50 good quality clusters identified per patient and time point with the unsupervised analysis using MegaClust. From the 50 clusters, 40 could be attributed to the 10 predefined cell subsets from the supervised analysis while 10 clusters could not be assigned.