TABLE 3.
Statistics showing the extent of detectable sequence similarity on each of the 33 CASP12 targets with their PDBIDs specified at http://predictioncenter.org/casp12/targetlist.cgi. First column: PDBID of the 3D experimental structure of each CASP12 target. Second column: The coverage statistics in terms of the total number of amino acids (#a.a.) within the amino acid (sub-)sequences defined by the dissected regions of the target protein with detectable sequence similarity with amino acid (sub-)sequences of their corresponding concept usage instances (see the main text). Third column: The total number of amino acids in the target protein, cumulative over all chains. Fourth column: Percentage coverage = Second column*100/Third column.
| Target’s | #a.a.’s in regions | Total #a.a.’s | |
|---|---|---|---|
| PDBID | with usage seq hits | in all chains | %Covered |
| 3JB5 | 1046 | 2076 | 50.4 |
| 4YMP | 202 | 215 | 94.0 |
| 5A7D | 4468 | 5065 | 88.2 |
| 5AOT | 91 | 102 | 89.2 |
| 5AOZ | 125 | 141 | 88.7 |
| 5D9G | 154 | 502 | 30.7 |
| 5ERE | 417 | 540 | 77.2 |
| 5FHY | 155 | 458 | 33.8 |
| 5FJL | 88 | 136 | 64.7 |
| 5G3Q | 100 | 168 | 59.5 |
| 5G5N | 580 | 1022 | 56.8 |
| 5HKQ | 160 | 263 | 60.8 |
| 5IDJ | 63 | 242 | 26.0 |
| 5J4A | 339 | 440 | 77.0 |
| 5J5V | 815 | 1065 | 76.5 |
| 5JMB | 103 | 182 | 56.6 |
| 5JMU | 172 | 219 | 78.5 |
| 5JO9 | 215 | 239 | 90.0 |
| 5JZR | 203 | 262 | 77.5 |
| 5KKP | 166 | 509 | 32.6 |
| 5KO9 | 73 | 253 | 28.9 |
| 5LEV | 323 | 375 | 86.1 |
| 5M2O | 171 | 211 | 81.0 |
| 5MQP | 2674 | 4801 | 55.7 |
| 5NSJ | 150 | 284 | 52.8 |
| 5NV4 | 713 | 1377 | 51.8 |
| 5SY1 | 786 | 1458 | 53.9 |
| 5T87 | 444 | 745 | 59.6 |
| 5TF2 | 331 | 338 | 97.9 |
| 5TJ4 | 2640 | 5462 | 48.3 |
| 5UNB | 378 | 681 | 55.5 |
| 5UVN | 954 | 2496 | 38.2 |
| 5UW2 | 211 | 332 | 63.6 |