Skip to main content
. 2021 May 14;12:249. doi: 10.1186/s13287-021-02332-7

Table 2.

Predicted consequential pairing of target region in the transcript and miR-424-5p

Target gene Representative transcript Gene name Transcript position Predicted consequential pairing of target region Transcript (top) and miRNA (bottom) Site type
CCND1 ENST00000227507.2 Cyclin D1 1961–1967 3′UTR

(Transcript)

5′ CCAUUUUCUUAUUGCGCUGCUAC 3′

(miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

7mer-A1
2033–2040 3′UTR

(Transcript)

5′ CUCUUUCACAUUGUUUGCUGCUA 3′

(miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

8mer
VEGFA ENST00000372067.3 Vascular endothelial growth factor A 276–283 3′UTR

(Transcript)

5′CCAUUUUAUUUUUCUUGCUGCUA 3′ (miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

8mer
CD40 ENSG00000101017 CD40, TNF receptor superfamily member 5

61–71

3′UTR

(Transcript)

5′ CUUCCUGGCUCCAACACUGCUGCUC 3′

(miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

7mer
COX2 ENSG00000073756 (PTGS2) Cyclooxygenase-2

165–179

3′UTR

(Transcript)

5′ UGAUUUGUUAUUAACAUUGAUCGCUG 3′

(miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

6mer
INSR ENSG00000171105 Insulin receptor

4218–4241

3′UTR

Transcript)

5′UCCUCAAAUUGACCAAUAGCUGCUGC 3′

(miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

7mer

3844–3871

3′UTR

(Transcript)

5′UCAUCAUGAUCACUGAUUACUUGCUGCUC3′

(miRNA)

3′ AAGUUUUGUACUUAACGACGAC 5′

8mer

TargetScan Human, release 7.1 (www.targetscan.org) and Diana-TarBase v8 (http://carolina.imis.athena-innovation.gr/diana_tools/web/index.php?r=tarbasev8%2Findex) databases were used to predict the interaction sites between the transcripts and miR-424-5p