Table 1.
Summary of major characteristics of plastomes in Myrtales and related outgroups
| Species name | lastomes GenBank accession number | Genome size (bp) | LSC Length (bp) |
SSC Length (bp) |
IR Length (bp) |
Number of genes | G+C(%) | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CDS | tRNAs | rRNAs | Total genome | LSC | SSC | IR | ||||||
| Allomaieta villosa | NC_031875.1 | 156452 | 85915 | 16975 | 26781 | 80 | 30 | 4 | 36.90% | 34.70% | 30.60% | 42.50% |
| Scorpiothyrsus shangszeensis | MK994866.1 | 156371 | 85899 | 16902 | 26785 | 80 | 30 | 4 | 36.90% | 34.70% | 30.60% | 42.50% |
| Sonerila borneensis | MK994893.1 | 154804 | 84872 | 16480 | 26726 | 80 | 30 | 4 | 37.30% | 35.10% | 31.00% | 42.60% |
| Sporoxeia petelotii | MK994904.1 | 156529 | 86026 | 17037 | 26733 | 80 | 30 | 4 | 36.90% | 34.80% | 30.50% | 42.50% |
| Styrophyton caudatum | MK994860.1 | 156386 | 85920 | 16930 | 26768 | 80 | 30 | 4 | 36.90% | 34.70% | 30.40% | 42.50% |
| Tibouchina longifolia | NC_031889.1 | 156789 | 86297 | 17124 | 26684 | 81 | 30 | 4 | 37.10% | 34.90% | 31.10% | 42.50% |
| Tigridiopalma magnifica | NC_036021.1 | 155663 | 85161 | 16932 | 26785 | 79 | 31 | 4 | 37.10% | 35.00% | 30.70% | 42.50% |
| Triolena amazonica | NC_031890.1 | 156652 | 86200 | 16970 | 26741 | 80 | 30 | 4 | 36.90% | 34.70% | 30.70% | 42.50% |
| Anerincleistus bracteatus | MK994899.1 | 156862 | 86293 | 16989 | 26790 | 79 | 30 | 4 | 37.00% | 34.80% | 30.60% | 42.50% |
| Barthea barthei | MK994907.1 | 155948 | 85540 | 16808 | 26791 | 79 | 30 | 4 | 37.00% | 34.80% | 30.50% | 42.50% |
| Bertolonia acuminata | NC_031876.1 | 156045 | 85571 | 17008 | 26733 | 80 | 30 | 4 | 37.00% | 34.70% | 30.80% | 42.50% |
| Blakea schlimii | NC_031877.1 | 155862 | 85370 | 16998 | 36747 | 80 | 30 | 4 | 37.10% | 34.90% | 30.90% | 42.50% |
| Blastus cochinchinensis | MK994909.1 | 155969 | 85900 | 16445 | 26812 | 79 | 30 | 4 | 37.00% | 34.80% | 30.70% | 42.40% |
| Bredia okinawensis | MK994873.1 | 156023 | 85502 | 16925 | 26798 | 79 | 30 | 4 | 37.00% | 34.80% | 30.50% | 42.50% |
| Cyphotheca montana | MK994852.1 | 156422 | 85898 | 16972 | 26776 | 79 | 30 | 4 | 37.00% | 34.80% | 30.60% | 42.50% |
| Dissochaeta beccariana | MK994889.1 | 156285 | 85955 | 16933 | 26702 | 79 | 30 | 4 | 36.90% | 34.60% | 30.80% | 42.50% |
| Driessenia phasmolacuna | MK994923.1 | 156620 | 86031 | 17055 | 26767 | 79 | 30 | 4 | 36.80% | 34.60% | 30.30% | 42.50% |
| Fordiophyton jinpingense | MK994875.1 | 154430 | 84239 | 16799 | 26696 | 79 | 30 | 4 | 37.20% | 35.10% | 30.70% | 42.50% |
| Macrolenes pachygyna | MK994894.1 | 156366 | 85966 | 16893 | 26754 | 79 | 30 | 4 | 37.00% | 34.80% | 30.80% | 42.50% |
| Medinilla speciosa | MK994885.1 | 155084 | 84768 | 16752 | 26782 | 79 | 30 | 4 | 37.00% | 34.80% | 30.70% | 42.50% |
| Melastoma candidum | NC_034716.1 | 156682 | 86084 | 17094 | 26752 | 79 | 29 | 4 | 37.20% | 35.00% | 31.20% | 42.50% |
| Merianthera pulchra | NC_031881.1 | 156168 | 85621 | 17001 | 26773 | 80 | 30 | 4 | 37.00% | 34.80% | 30.70% | 42.40% |
| Microlicia cogniauxiana | NC_043792.1 | 155732 | 90463 | 19043 | 23902 | 79 | 30 | 4 | 37.00% | 34.90% | 33.30% | 43.30% |
| Nepsera aquatica | NC_031883.1 | 155110 | 84644 | 17066 | 26700 | 80 | 30 | 4 | 37.10% | 34.80% | 31.00% | 42.60% |
| Sarcopyramis napalensis | MK994868.1 | 153304 | 83691 | 16153 | 26730 | 79 | 30 | 4 | 37.00% | 34.80% | 30.50% | 42.50% |
| Ochthocharis bornensis | MK994895.1 | 156672 | 86033 | 17101 | 26769 | 79 | 30 | 4 | 36.90% | 34.70% | 30.70% | 42.50% |
| Opisthocentra clidemioides | NC_031884.1 | 156352 | 85866 | 16942 | 26772 | 80 | 30 | 4 | 37.00% | 34.80% | 30.90% | 42.50% |
| Oxyspora teretipetiolata | MK994853.1 | 156303 | 85767 | 17000 | 26768 | 79 | 30 | 4 | 36.90% | 34.70% | 30.50% | 42.50% |
| Phyllagathis suberalata | MK994928.1 | 156075 | 85429 | 17114 | 26766 | 79 | 30 | 4 | 37.00% | 34.80% | 30.50% | 42.50% |
| Plagiopetalum serratum | MK994902.1 | 156181 | 85924 | 16783 | 26737 | 79 | 30 | 4 | 37.00% | 34.80% | 30.70% | 42.50% |
| Pterogastra divaricata | NC_031885.1 | 154948 | 84718 | 17156 | 26537 | 79 | 30 | 4 | 37.20% | 35.10% | 31.20% | 42.50% |
| Rhexia virginica | NC_031886.1 | 154635 | 84459 | 16924 | 26626 | 80 | 30 | 4 | 37.20% | 35.10% | 31.10% | 42.50% |
| Rhynchanthera bracteata | NC_031887.1 | 155108 | 85093 | 16729 | 26643 | 80 | 30 | 4 | 37.00% | 34.70% | 30.70% | 42.60% |
| Tibouchina semidecandra | HCNGB, RL0146 | 155544 | 85204 | 17252 | 26544 | 79 | 30 | 4 | 37.00% | 34.90% | 31.10% | 42.40% |
| Salpinga maranonensis | NC_031888.1 | 153311 | 85128 | 16653 | 25765 | 79 | 29 | 4 | 37.40% | 35.30% | 31.70% | 42.80% |
| Miconia dodecandra | NC_031882.1 | 157216 | 86609 | 16999 | 26804 | 80 | 30 | 4 | 37.00% | 34.80% | 31.00% | 42.50% |
| Eriocnema fulva | NC_031878.1 | 155994 | 85431 | 16953 | 26805 | 80 | 30 | 4 | 37.00% | 34.80% | 30.80% | 42.50% |
| Graffenrieda moritziana | NC_031879.1 | 155733 | 85341 | 16924 | 26734 | 79 | 30 | 4 | 37.00% | 34.70% | 30.90% | 42.50% |
| Henriettea barkeri | NC_031880.1 | 156527 | 85991 | 17036 | 26750 | 80 | 30 | 4 | 36.90% | 34.70% | 30.60% | 42.50% |
| Astronia smilacifolia | MK994883.1 | 157991 | 87376 | 17074 | 26765 | 79 | 30 | 4 | 36.90% | 34.70% | 30.80% | 42.50% |
| Memecylon ligustrifolium | MK994913.1 | 157154 | 86723 | 17026 | 26735 | 79 | 30 | 4 | 37.10% | 34.90% | 31.00% | 42.50% |
| Pternandra korthalsiana | MK994877.1 | 157496 | 86730 | 17358 | 26747 | 79 | 30 | 4 | 37.00% | 34.90% | 30.90% | 42.30% |
| Rhodomyrtus tomentosa | NC_043848.1 | 156129 | 86298 | 18183 | 25824 | 79 | 30 | 4 | 38.10% | 35.10% | 30.80% | 42.90% |
| Psidium guajava | NC_033355.1 | 158841 | 87675 | 18464 | 26351 | 79 | 30 | 4 | 37.00% | 34.90% | 30.70% | 42.80% |
| Plinia cauliflora | NC_039395.1 | 159095 | 88182 | 18615 | 26159 | 79 | 30 | 4 | 37.00% | 34.80% | 30.80% | 42.70% |
| Campomanesia xanthocarpa | KY392760.1 | 158131 | 87596 | 18595 | 25970 | 78 | 30 | 4 | 37.00% | 34.80% | 30.60% | 42.90% |
| Acca sellowiana | KX289887.1 | 159370 | 88028 | 18598 | 26372 | 80 | 30 | 4 | 37.00% | 34.90% | 30.60% | 42.80% |
| Stockwellia quadrifida | NC_022414.1 | 159561 | 88247 | 18544 | 26385 | 79 | 30 | 4 | 36.90% | 34.70% | 30.70% | 42.70% |
| Eucalyptus grandis | HCNGB, RL0106 | 160459 | 88939 | 18750 | 26385 | 81 | 30 | 4 | 36.80% | 34.70% | 36.80% | 42.70% |
| Eucalyptus microcorys | NC_022404.1 | 160225 | 89051 | 18410 | 26382 | 79 | 30 | 4 | 36.80% | 34.70% | 30.50% | 42.70% |
| Eucalyptus erythrocorys | NC_022406.1 | 159742 | 88691 | 18287 | 26382 | 79 | 30 | 4 | 36.90% | 34.70% | 30.40% | 42.70% |
| Corymbia tessellaris | NC_022410.1 | 160127 | 88617 | 18692 | 26409 | 79 | 30 | 4 | 36.80% | 34.60% | 30.50% | 42.70% |
| Corymbia maculata | NC_022408.1 | 160045 | 88557 | 18670 | 26409 | 79 | 30 | 4 | 36.80% | 34.60% | 30.50% | 42.70% |
| Corymbia eximia | NC_022409.1 | 160012 | 88522 | 18672 | 26409 | 79 | 30 | 4 | 36.80% | 34.60% | 30.50% | 42.70% |
| Angophora floribunda | NC_022411.1 | 160245 | 88715 | 18746 | 26392 | 79 | 30 | 4 | 36.80% | 34.50% | 30.50% | 42.70% |
| Angophora costata | NC_022412.1 | 160326 | 88769 | 18773 | 26392 | 79 | 30 | 4 | 36.80% | 34.50% | 30.50% | 42.70% |
| Allosyncarpia ternata | NC_022413.1 | 159593 | 88218 | 18571 | 26402 | 79 | 30 | 4 | 37.50% | 34.60% | 30.50% | 42.70% |
| Heteropyxis natalensis | NC_043799.1 | 159859 | 87884 | 18919 | 26528 | 79 | 30 | 4 | 36.90% | 34.80% | 30.70% | 42.70% |
| Syzygium forrestii | HCNGB, RL0700 | 159996 | 88560 | 18608 | 26414 | 80 | 30 | 4 | 36.90% | 34.80% | 30.80% | 42.60% |
| Syzygium cumini | HCNGB, RL0850 | 159996 | 88560 | 18608 | 26414 | 79 | 30 | 4 | 36.90% | 34.80% | 30.80% | 42.60% |
| Melaleuca leucadendra | HCNGB, RL0233 | 160317 | 88776 | 18619 | 26461 | 80 | 30 | 4 | 36.70% | 34.50% | 30.40% | 42.50% |
| Ruizterania albiflora | NC_043804.1 | 162345 | 90200 | 19417 | 28364 | 79 | 30 | 4 | 36.50% | 34.20% | 30.30% | 42.70% |
| Vochysia acuminata | NC_043811.1 | 171315 | 91249 | 11150 | 34457 | 79 | 30 | 4 | 35.90% | 33.80% | 30.60% | 39.70% |
| Salvertia convallariodora | NC_043806.1 | 171267 | 91243 | 11152 | 34435 | 79 | 30 | 4 | 35.90% | 33.80% | 30.60% | 39.70% |
| Qualea grandiflora | NC_043803.1 | 161026 | 90880 | 18260 | 26443 | 79 | 30 | 4 | 36.50% | 34.20% | 30.40% | 42.70% |
| Callisthene erythroclada | NC_043793.1 | 161626 | 89825 | 19351 | 26225 | 79 | 30 | 4 | 36.70% | 34.50% | 30.50% | 42.70% |
| Korupodendron songweanum | NC_043798.1 | 161149 | 88587 | 18640 | 26956 | 78 | 30 | 4 | 36.60% | 34.40% | 30.40% | 42.40% |
| Erisma bracteosum | NC_043794.1 | 160687 | 89210 | 18740 | 26369 | 79 | 30 | 4 | 36.40% | 34.20% | 30.30% | 42.40% |
| Duabanga grandiflora | NC_042899.1 | 156084 | 86467 | 16502 | 26556 | 80 | 30 | 4 | 37.50% | 35.60% | 31.30% | 42.50% |
| Lagerstroemia calyculata | NC_042897.1 | 152294 | 84012 | 16798 | 25742 | 80 | 30 | 4 | 37.70% | 36.00% | 31.20% | 42.50% |
| Lagerstroemia excelsa | NC_042896.1 | 152214 | 84053 | 16917 | 25622 | 80 | 30 | 4 | 37.60% | 35.90% | 31.00% | 42.50% |
| Lagerstroemia venusta | NC_042892.1 | 152521 | 84194 | 16833 | 25747 | 80 | 30 | 4 | 37.60% | 35.90% | 31.00% | 42.50% |
| Lawsonia inermis | NC_042369.1 | 157755 | 88423 | 17386 | 25973 | 80 | 30 | 4 | 36.90% | 34.80% | 31.00% | 42.50% |
| Sonneratia alba | NC_039975.1 | 153061 | 87226 | 18033 | 23901 | 80 | 29 | 4 | 37.30% | 35.40% | 31.10% | 43.10% |
| Trapa maximowiczii | NC_037023.1 | 155577 | 88528 | 18273 | 24388 | 78 | 31 | 4 | 36.40% | 34.20% | 30.20% | 42.80% |
| Trapa natans | NC_042895.1 | 155553 | 88472 | 18274 | 24387 | 80 | 30 | 4 | 36.40% | 34.20% | 30.20% | 42.80% |
| Lythrum salicaria | NC_042891.1 | 158483 | 88997 | 18530 | 25477 | 80 | 30 | 4 | 36.80% | 34.80% | 30.70% | 42.60% |
| Heimia apetala | NC_043797.1 | 159218 | 88570 | 18822 | 25913 | 79 | 30 | 4 | 37.00% | 35.00% | 30.60% | 42.60% |
| Pemphis acidula | NC_041439.1 | 160054 | 89785 | 18883 | 25693 | 80 | 30 | 4 | 36.50% | 34.30% | 29.70% | 42.70% |
| Punica granatum | NC_035240.1 | 158633 | 89017 | 18686 | 25465 | 79 | 30 | 4 | 36.90% | 34.90% | 30.60% | 42.80% |
| Woodfordia fruticosa | NC_042898.1 | 159380 | 89569 | 18697 | 25557 | 80 | 30 | 4 | 36.60% | 34.50% | 30.20% | 42.70% |
| Oenothera villaricae | NC_030532.1 | 165779 | 87891 | 16200 | 30844 | 78 | 31 | 4 | 38.90% | 37.30% | 35.30% | 42.10% |
| Epilobium ulleungensis | NC_039575.1 | 160912 | 88915 | 17327 | 27335 | 80 | 30 | 4 | 38.20% | 36.30% | 33.20% | 42.80% |
| Ludwigia octovalvis | NC_031385.1 | 159396 | 90183 | 19703 | 24755 | 77 | 30 | 4 | 37.40% | 35.20% | 32.00% | 43.50% |
| Terminalia guyanensis | NC_043807.1 | 159750 | 88671 | 18413 | 26333 | 79 | 30 | 4 | 37.00% | 34.70% | 30.80% | 43.00% |
| Lumnitzera racemosa | NC_042408.1 | 159473 | 88056 | 18613 | 26402 | 79 | 30 | 4 | 37.00% | 34.70% | 30.70% | 42.90% |
| Lumnitzera littorea | NC_039752.1 | 159687 | 88323 | 18558 | 26403 | 79 | 30 | 4 | 37.00% | 34.70% | 30.90% | 43.00% |
| Laguncularia racemosa | NC_042719.1 | 158311 | 87022 | 18886 | 26247 | 79 | 30 | 4 | 37.00% | 34.80% | 30.30% | 43.00% |
| Combretum kraussii | HCNGB, RL0855 | 154081 | 85457 | 17093 | 25734 | 81 | 30 | 4 | 37.40% | 35.50% | 31.00% | 42.80% |
| Combretum littoreum | HCNGB, RL0942 | 161773 | 90179 | 18730 | 26432 | 79 | 30 | 4 | 37.10% | 34.80% | 30.90% | 43.00% |
| Terminalia catappa | B244 | 159,873 | 88,794 | 18,013 | 26,533 | 80 | 30 | 4 | 36.90% | 30.90% | 30.90% | 42.80% |
| Combretum malabaricum | B246 | 159,425 | 88,399 | 17,848 | 26,589 | 80 | 30 | 4 | 37.20% | 35.00% | 31.10% | 42.90% |
| Viviania marifolia | NC_023259.1 | 157291 | 83138 | 4551 | 34801 | 72 | 30 | 4 | 37.70% | 35.80% | 29.20% | 40.40% |
| Pelargonium tetragonum | NC_031205.1 | 173410 | 75181 | 6764 | 45736 | 82 | 30 | 4 | 39.80% | 38.40% | 34.70% | 41.40% |
| Pelargonium quercifolium | NC_031203.1 | 170569 | 87543 | 6706 | 38163 | 78 | 30 | 4 | 39.00% | 38.00% | 33.80% | 40.60% |