| TCGA | The Cancer Genome Atlas |
| SNF | Similarity network fusion |
| DL | Deep learning |
| GBM | Glioblastoma multiforme |
| COAD | Colon Adenocarcinoma |
| KRCC | Kidney renal clear cell carcinoma |
| BIC | Breast invasive carcinoma |
| VAR | Maximum variance |
| PCA | Principal Component Analysis |
| PAM | Partitioning around medoids |
| DE | Differential expression |
| GO | Gene Ontology |
| CL1 | Cluster 1 |
| GEO | Gene Expression Omnibus |
| TME | surrounding tumor microenvironmen |