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. 2021 Apr 28;22(9):4643. doi: 10.3390/ijms22094643

Table 2.

Description of the products of the genes in Table 1. Function retrieved from https://string-db.org/ (accessed on 10 April 2021).

Gene Ensembl Identifier Protein Function (Information Obtained from STRING Data Base)
SNCA ENSP00000338345 α-synuclein Involved in regulating dopamine release and transport. Induces the fibrillization of tau protein. Reduces neuronal responsiveness to different apoptotic stimuli, thus promoting a decreased caspase-3 activation.
LRRK2 ENSP00000298910 Leucine-rich repeat serine/threonine-protein kinase 2 Regulates autophagy in a positive way by means of the calcium- dependent activation of the CaMKK/AMPK pathway, also involving the activation of nicotinic acid adenine dinucleotide phosphate (NAADP) receptors, increases in lysosomal pH, and release of Ca++ from lysosomes.
GBA ENSP00000314508 Glucosylceramidase beta Involved in the hydrolization of glucocerebroside. Localized in lysosomes.
UCHL1 ENSP00000284440 Ubiquitin carboxyl-terminal hydrolase isozyme L1 Deubiquitinating enzyme, generates ubiquitin monomers. Might prevent the degradation of monoubiquitin in lysosomes. Its expression is highly specific to neurons and to cells of the diffuse neuroendocrine system and their tumors.
VPS35 ENSP00000299138 Vacuolar protein sorting-associated protein 35 Involved in autophagy. Is part of the retromer cargo-selective complex (CSC), which is responsible for transporting select cargo proteins between vesicular structures (e.g., endosomes, lysosomes, vacuoles) and the Golgi apparatus.
PRKN ENSP00000355865 E3 ubiquitin-protein ligase parkin Ubiquitin ligase; covalently binds ubiquitin residues onto proteins. Involved in the removal of abnormally folded or damaged proteins thanks to ‘Lys-63’-linked polyubiquitination of misfolded proteins.
PINK1 ENSP00000364204 Serine/threonine-protein kinase PINK1 Localized in mitochondria. Protects cells against stress-induced mitochondrial dysfunction by phosphorylating mitochondrial proteins. By means of activation and translocation of PRKN participates in the clearance of damaged mitochondria via selective autophagy (mitophagy).
ATP13A2 ENSP00000327214 Cation-transporting ATPase 13A2 ATPase involved in the transport of divalent transition metal cations and the maintenance of neuronal integrity. It is necessary for a correct lysosomal and mitochondrial maintenance.
PLA2G6 ENSP00000333142 85/88 kDa calcium-independent phospholipase A2 Involved in the release of fatty acids from phospholipids. Implicated in normal phospholipid remodeling. It has also been involved in NO- or vasopressin-induced arachidonic acid release and in leukotriene and prostaglandin production.
DNAJC6 ENSP00000360108 Putative tyrosine-protein phosphatase auxilin Promotes uncoating of clathrin-coated vesicles by recruiting HSPA8/HSC70 to clathrin-coated vesicles. Involved in clathrin-mediated endocytosis in neurons.
SYNJ1 ENSP00000409667 Synaptojanin-1 Phosphoinositide phosphatase, regulates levels of membrane phosphatidylinositol-4,5-bisphosphate (PIP2). Involved in the rearrangement of actin filaments downstream of tyrosine kinase and ASH/GRB2 by means of hydrolyzing PIP2 bound to actin regulatory proteins.
DJ-1/ PARK7 ENSP00000418770 Protein/nucleic acid deglycase DJ-1 Under an oxidative condition, via its chaperone activity, inhibits the aggregation of α-synuclein, thus functioning as a redox-sensitive chaperone and as a sensor for oxidative stress. Deglycates proteins and nucleotides, and the Maillard adducts formed between amino groups of proteins or nucleotides and reactive carbonyl groups of glyoxals.
FBXO7 ENSP00000266087 F-box only protein 7 Part of a SCF (SKP1-CUL1-F- box protein) E3 ubiquitin-protein ligase complex involved in protein ubiquitination. Role in the clearance of damaged mitochondria (mitophagy).