TABLE 2.
Differentially regulated proteins (>1.5-fold) in the ModS1 phasevarion
| GenPept accession no. | Protein | Fold changea | P |
|---|---|---|---|
| Downregulated in modS1 ON | |||
| WP_002940030.1 | 30S ribosomal protein S12 | 2.87 | 1.43 × 10−8 |
| WP_002938143.1 | ABC transporter permease | 2.48 | 6.54 × 10−7 |
| WP_009909754.1 | 50S ribosomal protein L27 | 1.92 | 9.04 × 10−7 |
| WP_014638653.1 | ABC transporter substrate-binding protein | 1.65 | 4.81 × 10−7 |
| WP_002936253.1 | DegV family protein | 1.62 | 2.53 × 10−4 |
| WP_023369127.1 | Sugar ABC transporter substrate-binding protein | 1.55 | 7.86 × 10−14 |
| WP_004195491.1 | 50S ribosomal protein L23 | 1.54 | 9.68 × 10−8 |
| Upregulated in modS1 ON | |||
| WP_002936659.1 | 50S ribosomal protein L29 | 9.14 | 2.76 × 10−8 |
| WP_002940438.1 | Amino acid ABC transporter ATP-binding protein | 2.1 | 8.50 × 10−4 |
| WP_012027640.1 | Ribosome biogenesis GTPase Der | 2.08 | 3.12 × 10−6 |
| WP_002942806.1 | CsbD family protein | 2.03 | 6.94 × 10−8 |
| WP_014636557.1 | Transcriptional repressor | 1.99 | 1.78 × 10−15 |
| WP_002936247.1 | HU family DNA-binding protein | 1.97 | 1.81 × 10−6 |
| WP_002936483.1 | 50S ribosomal protein L7/L12 | 1.89 | 1.82 × 10−14 |
| WP_002938891.1 | Acyl carrier protein | 1.88 | ≤1.00 × 10−17 |
| WP_002936048.1 | DUF1846 domain-containing protein | 1.86 | ≤1.00 × 10−17 |
| WP_014736429.1 | Nitroreductase family protein | 1.77 | 2.17 × 10−5 |
| WP_014735259.1 | 30S ribosomal protein S10 | 1.76 | ≤1.00 × 10−17 |
| WP_002940682.1 | 30S ribosomal protein S16 | 1.73 | 6.91 × 10−8 |
| WP_002934959.1 | DUF1149 family protein | 1.67 | 4.09 × 10−14 |
| WP_023368958.1 | Chromosomal replication initiator protein DnaA | 1.66 | ≤1.00 × 10−17 |
| WP_023369777.1 | dTDP-4-dehydrorhamnose reductase | 1.64 | 1.96 × 10−10 |
| WP_002936660.1 | 50S ribosomal protein L16 | 1.62 | 5.40 × 10−10 |
| WP_004194840.1 | DUF2829 domain-containing protein | 1.6 | 1.60 × 10−4 |
| WP_012027178.1 | PTS sugar transporter subunit IIA | 1.6 | 3.27 × 10−3 |
| WP_002936656.1 | 50S ribosomal protein L24 | 1.59 | 3.52 × 10−6 |
| WP_002937025.1 | Response regulator transcription factor | 1.59 | 2.89 × 10−3 |
| WP_011922043.1 | DivIVA domain-containing protein | 1.59 | 8.40 × 10−4 |
| WP_002938966.1 | YlbF/YmcA family competence regulator | 1.58 | ≤1.00 × 10−17 |
| WP_012775074.1 | Alkylphosphonate utilization protein | 1.54 | 8.72 × 10−4 |
| WP_023370402.1 | ROK family glucokinase | 1.53 | ≤1.00 × 10−17 |
| WP_002936622.1 | 30S ribosomal protein S13 | 1.51 | 1.00 × 10−4 |
| WP_023369315.1 | Glycine cleavage system protein H | 1.5 | 1.94 × 10−12 |
a
Fold change presented as modS1 ON versus modS1 OFF.