Table 1.
Sample Type | Sample Volume |
Process Time | Lysis | NA Yield/Limits of Detection (in Eluted Volume) |
Extraction Matrix and Motion Principles |
Ref |
---|---|---|---|---|---|---|
Whole blood | 200 µL | 30 min | On | Total NA, ∼105 DNA copies (in 100 µL) |
Silica-coated magnetic beads, magnetic and centrifugal-driven |
[28] |
Whole blood | 1 µL | 7–8 min | On | Genomic DNA, 21.8 ± 2.3 ng/µL |
Glass fiber filter, pressure-driven |
[29] |
Whole blood | 0.1–100 µL | 1 min | Off | Human mRNA Yield n.a. |
Oligo-dT magnetic beads, lateral magnetophoresis |
[30] |
Whole blood | 10 µL | <20 min | On | Genomic DNA, 39.7 ng/µL (in 60 µL) |
Porous silicon wafer, pressure-driven |
[31] |
Whole blood | 1 µL | n.a. | On | Pathogen DNA Yield n.a. |
Isotachophoresis, electrokinetic-driven |
[32] |
Whole blood | 50 µL | <60 min | Off | Genomic DNA Yield n.a. |
Silica micropillars, pressure-driven |
[33] |
Whole blood | 5.4 µL | <30 min | On | Pathogen DNA, ∼30 ng/µL (in 25 µL) |
Magnetic beads, magnetic-driven |
[34] |
Whole blood | 200 µL | 20 min | On | Genomic DNA, 33.26 ± 2.5 ng/µL (in 5 µL) |
Antibody-coated magnetic beads, pressure-driven |
[35] |
Whole blood | 300 µL | 27 min | On | Genomic DNA, 54.3 ng/µL (in 200 µL) |
Glass fiber filter, centrifugal-driven |
[36] |
Whole blood | 20 µL | <10 min | Off | Genomic DNA, 38.8 ng/µL (in 25 µL) |
Aluminium oxide membrane, pressure-driven |
[37] |
Whole blood | 10 µL | n.a. | Off | Genomic DNA, 24 ± 0.2 ng/µL (in 2 µL) |
Surface packed with silica beads + TMOS monolith, pressure-driven |
[38] |
Whole blood | 1 µL | n.a. | On | Genomic DNA, 10 ng/µL (in 70 µL) |
Silica monolith, pressure-driven |
[39] |
Whole blood | 100 µL | 23 min | Off | Pathogen RNA, LoD 103–106 copies/mL (in 100 µL) |
Glass fiber filter, capillary absorption |
[40] |
Whole blood | 100 µL | 12 min | On | Pathogen DNA Yield n.a. |
Antibody-coated magnetic beads, magnetic and centrifugal-driven |
[41] |
Whole blood | 0.09 µL | n.a. | On | Genomic DNA Yield n.a. |
Magnetic beads, electrokinetic-driven |
[22] |
Whole blood | 5 µL | 50 min | On | Genomic DNA, 35.7 ng/µL (in 35 µL) |
Porous silicon wafer, pressure-driven |
[42] |
Whole blood | 4 µL | 9–30 min | Off | Genomic DNA Yield n.a. |
Sol-gel packed with silica beads, pressure-driven |
[25] |
Whole blood | 10 µL | <30 min | Off | Genomic DNA, ∼9.8 ng (in 70 µL) |
Sol-gel packed with silica beads, pressure-driven |
[43] |
Whole blood | 4 µL | <10 min | Off | Total DNA Yield n.a. |
Surface packed with silica beads, pressure-driven |
[44] |
Whole blood | 5 µL | 10 min | Off | Genomic DNA, 48.7 ng (in 28 µL) |
Chitosan-coated surface, pressure-driven |
[45] |
Whole blood | 0.5 µL | 20 min | On | Genomic DNA, 19.3 ± 4.9 ng/µL (in 100 µL) |
Chitosan-coated glass fiber filter, pressure-driven |
[46] |
Whole blood | n.a. | <5 min | Off | Total RNA Yield n.a. |
Glass fiber filter, pressure-driven |
[47] |
Whole blood | 50 µL | 1 min | Off | Human mRNA Yield n.a. |
Oligo-dT magnetic beads, magnetic-driven |
[48] |
Whole blood | 1 µL | 40 min | Off | Genomic DNA, 8 ng/µL |
Magnetic beads, magnetic-driven |
[49] |
Whole blood | 5 µL | 5 min | On | Pathogen NA, 16–35 ng/µL (in 20 µL) |
Magnetic beads, magnetic-driven |
[50] |
Whole blood | 4 mL | <15 min | On | cfDNA Yield n.a. |
Silica-coated magnetic beads, centrifugal-driven |
[51] |
Whole blood | 2 µL | n.a. | On | Genomic DNA Yield n.a. |
DMA and APTES-coated surface, pressure-driven |
[52] |
Whole blood | 10 µL | n.a. | On | Pathogen DNA, LoD 100 CFU/mL |
Glass fiber filter, centrifugal-driven |
[53] |
Whole blood | 500 µL | 15 min | On | Pathogen DNA, 100 copies/mL |
Magnetic beads, magnetic and centrifugal-driven |
[54] |
Whole blood | 30 µL | 2 min | On | Pathogen DNA, 10.000 copies/mL |
Glass fiber filter, capillary absorption |
[55] |
Whole blood | 20 µL | 3 min | On | Pathogen DNA Yield n.a. |
Glass fiber filter, capillary absorption |
[56] |
Whole blood | 25–100 µL | 20 min | Off | Total RNA, ∼250–450 ng (in 10 µL) |
Magnetic beads, electrokinetic-driven |
[57] |
Plasma | 140 µL | <30 min | On | Total NA, ∼40 ng/µL (in 20 µL) |
DMP and APTES-coated surface, pressure-driven |
[58] |
Plasma | 500 µL | 15 min | / | cfDNA, 10–100 ng/µL |
Glass fiber filter, pressure-driven |
[59] |
Serum | 30 µL | 2 min | On | Pathogen DNA, 10.000 copies/mL |
Glass fiber filter, capillary absorption |
[55] |
Serum | 200 µL | <10 min | On | Pathogen DNA, LoD 8 copies/reaction |
Silica-coated magnetic beads, centrifugal-driven |
[60] |
Serum | 50 µL | 1 min | On | Pathogen NA, LoD 1000 copies/mL |
Magnetic beads, magnetic and pressure-driven |
[61] |
Serum | n.a. | 30 min | Off | Pathogen DNA Yield n.a. |
Poly-DMAMS-coated surface, chemical adsorption |
[62] |
Serum | 100 µL | n.a. | On | Pathogen DNA Yield n.a. |
Magnetic beads, automatic pipetting |
[63] |
Serum | 200 µL | 30 min | On | Pathogen DNA Yield n.a. |
Silica-coated magnetic beads, magnetic and centrifugal-driven |
[64] |
Serum | 0.4 µL | <1 min | On | Pathogen DNA Yield n.a. |
Carboxyl magnetic beads, magnetic-driven |
[23] |
Buccal sample | 500 µL | 7–8 min | On | Genomic DNA Yield n.a. |
Glass fiber filter, pressure-driven |
[29] |
Buccal sample | 20 µL | n.a. | On | Genomic DNA, 4.03 ± 0.6 ng/µL |
Silica-based monolith, electrokinetic-driven |
[65] |
Buccal sample | 100 µL | n.a. | On | Pathogen NA, LoD 103 cells-virions/mL |
Glass fiber filter, pressure-driven |
[66] |
Buccal sample | 100 µL | 10 min | On | Genomic DNA, 50.45 ng/µL (in 125 µL) |
Silica-coated magnetic beads, pressure-driven |
[67] |
Buccal sample | 10 µL | 9–30 min | Off | Genomic DNA Yield n.a. |
Sol-gel packed with silica beads, pressure-driven |
[25] |
Buccal sample | 20 µL | 3 min | On | Pathogen DNA Yield n.a. |
Glass fiber filter, capillary absorption |
[56] |
Buccal sample | 100 µL | n.a. | On | Pathogen DNA Yield n.a. |
Magnetic beads, automatic pipetting |
[63] |
Nasal sample | 30 µL | 2 min | On | Pathogen DNA, 10.000 copies/mL |
Glass fiber filter, capillary absorption |
[55] |
Nasal sample | 50 µL | n.a. | On | Pathogen DNA, LoD 1000 CFU/mL |
Glass fiber filter, centrifugal-driven |
[53] |
Nasal sample | 1 mL | <20 min | On | Pathogen DNA, LoD ∼61 CFU/mL |
Surface packed with silica beads, pressure-driven |
[68] |
Nasal sample | 100 µL | n.a. | Off | Pathogen RNA, LoD 103 copies/mL |
Silica-based monolith, pressure-driven |
[69] |
Nasal sample | 30 µL | 15 min | Off | Pathogen RNA Yield n.a. |
Silica-coated magnetic beads, powerless magnetic-driven |
[70] |
Nasal sample | 500 µL | n.a. | On | Pathogen RNA Yield n.a. |
Silica-coated magnetic beads, magnetic and centrifugal-driven |
[71] |
Nasal sample | 8 µL | <10 min | Off | Pathogen DNA Yield n.a. |
Surface packed with silica beads, pressure-driven |
[44] |
Nasal sample | 10 µL | 9–30 min | Off | Pathogen DNA Yield n.a. |
Sol-gel packed with silica beads, pressure-driven |
[25] |
Nasal sample | 100 µL | n.a. | On | Pathogen NA Yield n.a. |
Glass fiber filter, pressure-driven |
[72] |
Stools | 200 mg | <40 min | On | Pathogen NA, 46.4 ng/µL of RNA (in 200 µL) 68.4 ng/µL of DNA (in 200 µL) |
Magnetic beads, pressure-driven |
[27] |
Stools | 400 µL | 7 min | On | Pathogen DNA, 59.3 ng/µL (in 10 µL) |
Silica-coated magnetic particles, electromagnetic-driven |
[73] |
Stools | 180–220 mg | 45 min | Off | Pathogen DNA, LoD 0.125 pg |
Porous polymer monolith, pressure-driven |
[74] |
Urine | 50 µL | 10 min | On | Genomic DNA Yield n.a. |
DMA and APTES-coated surface, pressure-driven |
[26] |
Urine | 10 µL | n.a. | On | Genomic DNA Yield n.a. |
DMA and APTES-coated surface, pressure-driven |
[52] |
Urine | 20 µL | 3 min | On | Pathogen DNA Yield n.a. |
Glass fiber filter, capillary absorption |
[56] |
Urine | 100 µL | <40 min | On | Pathogen DNA, LoD∼10 CFU/mL |
Porous polymer monolith packed with silica beads, pressure-driven |
[75] |
Semen | 2 µL | n.a. | On | Genomic NA Yield n.a. |
Surface packed with beads (silica + chitosan-coated silica), pressure-driven |
[9] |
Semen | 4 µL | 16 min | Off | Total RNA Yield n.a. |
Surface packed with silica beads, pressure-driven |
[10] |
Semen | 1 µL | n.a. | On | Genomic DNA Yield n.a. |
Sol-gel packed with silica beads, pressure-driven |
[24] |
Semen | 5 µL | 9–30 min | Off | Genomic DNA Yield n.a. |
Sol-gel packed with silica beads, pressure-driven |
[25] |
Semen | 1.5 µL | 17 min | Off | Genomic DNA, 17 ng (in 15 µL) |
Surface packed with silica beads, pressure-driven |
[76] |
Spinal Fluid | 40 µL | <30 min | Off | Genomic DNA Yield n.a. |
Sol-gel packed with silica beads, pressure-driven |
[43] |