Table 5.
Status of single chains, chain fragments, and the pilin complex. P–P: the status of the residues involved in the protein–protein interaction; No P–P: the remaining part of the molecule/chain after elimination of the residues involved in P–P; Beta, Helix: the status of fragments representing a given type of secondary structure determined within the monomer (Mon) and complex (Comp).
| Monomer | ||||
|---|---|---|---|---|
| PDB ID | Chain | Beta-Sheet | Helix | |
| 1HPW | 0.422 | 0.350 | 0.478 | |
| 2PIL | 0.609 | 0.392 | 0.811 | |
| Complex | ||||
| Complex | Mon/Compl | Beta Mon/Comp | Helix Mon/Comp | |
| 3J1R | 0.873 | 0.601/0.781 A /0.482 F /0.884 U |
||
| 5VXY | 0.803 | 0.645/0.740 A /0.779 F /0.700 U |
0.231/0.322 /0.546 /0.507 |
0.838/0.745 A /0.683 F /0.784 U |
| P–P | No P–P | |||
| 5VXY | 0.803 | 0.736/0.605 A /0.679 F /0.720 U |
0.752/0.523 A /0.663 F /0.538 U |
|