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. 2021 May 17;12(1):16–34. doi: 10.1016/j.jtcme.2021.05.001

Table 5.

Binding-free energies and each contributing energy term (±standard deviation; SD) for the investigated ligand-Mpro systems.

Energy terms (kJ/mol ± SD) N3
SAP5
SAP8
10–20 ns 30–60 ns 10–40 ns 45–100 ns 10–20 ns 30–40 ns 50–60 ns 70–100 ns
ΔEVan der Waal −223.49 ± 16.13 −191.55 ± 25.47 −191.92 ± 38.46 −126.29 ± 16.69 −131.91 ± 17.06 −82.94 ± 24.22 −69.16 ± 12.22 −79.99 ± 30.70
ΔEElectrostatic −53.69 ± 16.88 −40.34 ± 14.23 −111.20 ± 27.54 −44.23 ± 28.72 −88.82 ± 26.48 −9.01 ± 15.22 −22.97 ± 17.83 −18.17 ± 23.08
ΔESolvation; Polar 210.79 ± 25.22 205.22 ± 17.19 251.23 ± 44.24 143.33 ± 34.22 234.53 ± 50.14 217.95 ± 52.00 239.46 ± 56.74 233.36 ± 47.37
ΔESolvation; SASA −25.31 ± 2.11 −23.10 ± 2.59 −20.25 ± 4.26 −16.91 ± 2.04 −20.15 ± 2.11 −11.37 ± 3.62 −11.54 ± 2.11 −10.51 ± 4.16
ΔEBinding −91.70 ± 19.98 −49.77 ± 31.82 −72.14 ± 38.78 −44.10 ± 61.80 −6.35 ± 46.55 114.64 ± 63.03 135.79 ± 49.15 124.69 ± 73.97