Table 3.
Principal pathways of Inflammation Cluster for the subset B.
| Inflammation | Upregulated genes | Downregulated genes |
|---|---|---|
| IL-18 signaling pathway | NCF2, CCL4, PLOD3, BID, HCAR2, FN1, PTGS2, TGM2, ULBP2 | FOXN3, KLF2, PRKCB, CCL19, DES, ACTA2, NR0B2, SPON1 |
| Chemokine signaling pathway | CXCR2, CCL4 | CCL19, CCL11, CXCL14, VAV3, PRKCB, PRKACB, AKT3 |
| Spinal Cord Injury | E2F1, RTN4R, LILRB3, PTGS2, GJA1 | SLIT2, SLIT3, RGMA, VIM |
| Prostaglandin Synthesis and Regulation | PTGS2 | PTGFR, PTGER1, HPGD, HPGDS, AKR1C3, AKR1C1, AKR1C2 |
| B Cell Receptor Signaling Pathway | CD79B, CD79A, BLNK, BLK, CR2 | |
| T-Cell antigen Receptor (TCR) Signaling Pathway | RIPK2 | GRAP2, VAV3, VIM |
| IL1 and megakaryocytes in obesity | TIMP1, S100A9 | SELENBP1, FCER1A |
| TGF-beta Receptor Signaling | BAMBI, SERPINE1 | BMP4 |
| Interferon type I signaling pathways | SOCS3 | PDCD4, PTPRC |
| Inflammatory Response Pathway | FN1, LAMA5 | CD40LG |