Table 1.
Table of brain structure abbreviations.
| Acronym | Full structure name |
|---|---|
| AAA | Anterior amygdalar area |
| ac | Anterior commissure |
| ACAd | Anterior cingulate cortical area, dorsal part |
| cACAd | Anterior cingulate cortical area, dorsal part, caudal region |
| rACAd | Anterior cingulate cortical area, dorsal part, rostral region |
| ACAv | Anterior cingulate cortical area, ventral part |
| cACAv | Anterior cingulate cortical area, ventral part, caudal region |
| rACAv | Anterior cingulate cortical area, ventral part, rostral region |
| ACB | Nucleus accumbens |
| AD | Anterodorsal nucleus of the thalamus |
| ADP | Anterodorsal preoptic nucleus of the hypothalamus |
| AHN | Anterior hypothalamic nucleus |
| AI | Agranular insular cortical area |
| AId | Agranular insular cortical area, dorsal part |
| AIp | Agranular insular cortical area, posterior part |
| AIv | Agranular insular cortical area, ventral part |
| AM | Anteromedial nucleus of the thalamus |
| AMd | Anteromedial nucleus of the thalamus, dorsal part |
| AMv | Anteromedial nucleus of the thalamus, ventral part |
| AON | Anterior olfactory nucleus |
| AONm | Anterior olfactory nucleus, medial part |
| AONpv | Anterior olfactory nucleus, posteroventral part |
| ARH | Arcuate hypothalamic nucleus |
| AUD | Auditory cortical area |
| AUDd | Dorsal auditory cortical area |
| AUDp | Primary auditory cortical area |
| AUDv | Ventral auditory cortical area |
| AV | Anteroventral nucleus of the thalamus |
| AVP | Anteroventral preoptic nucleus |
| AVPV | Anteroventral periventricular nucleus |
| bic | Brachium of the inferior colliculus |
| BLA | Basolateral amygdalar complex |
| BLAa | Basolateral amygdalar nucleus, anterior part |
| BLA.ac | Basolateral amydalar nucleus, anterior part, caudal domain |
| BLA.al | Basolateral amydalar nucleus, anterior part, lateral domain |
| BLA.am | Basolateral amydalar nucleus, anterior part, medial domain |
| BLAp | Basolateral amygdalar nucleus, posterior part |
| BLAv | Basolateral amygdalar nucleus, ventral part |
| BMA | Basomedial amygdalar nucleus |
| BMAa | Basomedial amygdalar nucleus, anterior part |
| BMAp | Basomedial amygdalar nucleus, posterior part |
| BST | Bed nucleus of the stria terminalis |
| BSTal | Bed nucleus of the stria terminalis, anterolateral nucleus |
| BSTam | Bed nucleus of the stria terminalis, anteromedial nucleus |
| BSTdm | Bed nucleus of the stria terminalis, dorsomedial nucleus |
| BSTif | Bed nucleus of the stria terminalis, interfascicular nucleus |
| BSTmg | Bed nucleus of the stria terminalis, magnocellular nucleus |
| BSTpr | Bed nucleus of the stria terminalis, principal nucleus |
| BSTtr | Bed nucleus of the stria terminalis, transverse nucleus |
| BSTv | Bed nucleus of the stria terminalis, ventral nucleus |
| CA1 | Hippocampal field CA1 |
| CA1d | CA1 dorsal |
| CA1_slm | CA1 stratum lacunosum-moleculare |
| CA1_so | CA1 stratum oriens |
| CA1_sp | CA1 pyramidal layer |
| CA1_sr | CA1 stratum radiatum |
| CA1v | CA1 ventral |
| CA2 | Hippocampal field CA2 |
| CA2_so | CA2 stratum oriens |
| CA3 | Hippocampal field CA3 |
| CA3_so | CA3 stratum oriens |
| CA3_sp | CA3 pyramidal layer |
| CEA | Central amygdalar nucleus |
| CLA | Claustrum |
| CM | Central medial nucleus of the thalamus |
| COA | Cortical amygdalar area |
| COAa | Cortical amygdalar area, anterior part |
| COApl | Cortical amygdalar area, posterior part, lateral zone |
| COApm | Cortical amygdalar area, posterior part, medial zone |
| CP | Caudoputamen |
| CPc | Caudoputamen, caudal part |
| CPc.dm | Caudoputamen, caudal part, dorsomedial domain |
| CPc.v | Caudoputamen, caudal part, ventral domain |
| CPi | Caudoputamen, intermediate part |
| CPi.dm | Caudoputamen, intermediate part, dorsomedial domain |
| CPi.v | Caudoputamen, intermediate part, ventral domain |
| CPi.vl | Caudoputamen, intermediate part, ventrolateral domain |
| CPi.vm | Caudoputamen, intermediate part, ventromedial domain |
| DMH | Dorsomedial nucleus of the hypothalamus |
| DP | Dorsal peduncular area |
| ECT | Ectorhinal cortical area |
| cECT | Ectorhinal cortical area, caudal region |
| rECT | Ectorhinal cortical area, rostral region |
| ENT | Entorhinal cortical area |
| ENTl | Entorhinal cortical area, lateral part |
| cENTl | Entorhinal cortical area, lateral part, caudal region |
| rENTl | Entorhinal cortical area, lateral part, rostral region |
| ENTm | Entorhinal cortical area, medial part |
| EP | Endopiriform nucleus |
| EPd | Endopiriform nucleus, dorsal part |
| EPv | Endopiriform nucleus, ventral part |
| fr | Fasciculus retroflexus |
| FS | Fundus of the striatum |
| GU | Gustatory cortical area |
| IAD | Interanterodorsal nucleus of the thalamus |
| ILA | Infralimbic cortical area |
| IMD | Intermediodorsal nucleus of the thalamus |
| int | Internal capsule |
| LA | Lateral amygdalar area |
| LD | Laterodorsal nucleus of the thalamus |
| LHA | Lateral hypothalamic area |
| LP | Lateral posterior nucleus of the thalamus |
| LPO | Lateral preoptic nucleus |
| LS | Lateral septal nucleus |
| LSc | Lateral septal nucleus, caudal part |
| LSr | Lateral septal nucleus, rostral part |
| LSv | Lateral septal nucleus, ventral part |
| MB | Midbrain |
| MD | Mediodorsal nucleus of the thalamus |
| MDm | Mediodorsal nucleus of the thalamus, medial part |
| MEA | Medial amygdalar nucleus |
| MEAad | Medial amygdalar nucleus, anterodorsal part |
| MEAav | Medial amygdalar nucleus, anteroventral part |
| MEApd | Medial amygdalar nucleus, posterodorsal part |
| MEApv | Medial amygdalar nucleus, posteroventral part |
| MEPO | Median preoptic nucleus |
| MG | Medial geniculate complex |
| MGd | Medial geniculate complex, dorsal part |
| MGm | Medial geniculate complex, medial part |
| MGv | Medial geniculate complex, ventral part |
| MM | Medial mammillary nucleus |
| MOp | Primary motor cortical area |
| MOp m | Primary motor cortical area, mouth region |
| MOp ul | Primary motor cortical area, upper limb region |
| rMOp | Primary motor cortical area, rostral region |
| MOs | Secondary motor cortical area |
| MOs fef | Secondary motor cortical area, frontal eye field region |
| MOs ul | Secondary motor cortical area, upper limb region |
| rMOs | Secondary motor cortical area, rostral region |
| MPN | Medial preoptic nucleus |
| MPO | Medial preoptic area |
| MRN | Midbrain reticular nucleus |
| MS | Medial septal nuclei |
| mtt | Mammillothalamic tract |
| NDB | Nucleus of the diagonal band |
| NLOT | Nucleus of the lateral olfactory tract |
| ORB | Orbital cortical area |
| ORBl | Orbital cortical area, lateral part |
| ORBm | Orbital cortical area, medial part |
| ORBvl | Orbital cortical area, ventrolateral part |
| OT | Olfactory tubercle |
| PA | Posterior amygdalar nucleus |
| PAA | Piriform amygdalar area |
| PAR | Parasubiculum |
| PERI | Perirhinal cortical area |
| cPERI | Perirhinal cortical area, caudal region |
| rPERI | Perirhinal cortical area, rostral region |
| PF | Parafascicular nucleus of the thalamus |
| PH | Posterior hypothalamic nucleus |
| PIR | Piriform cortical area |
| PL | Prelimbic cortical area |
| PMv | Ventral premammillary nucleus |
| POST | Postsubiculum |
| PP | Peripeduncular nucleus |
| PRE | Presubiculum |
| PT | Parataenial nucleus of the thalamus |
| PTLp | Posterior parietal association area |
| PVp | Periventricular hypothalamic nucleus, posterior part |
| PVT | Paraventricular nucleus of the thalamus |
| cPVT | Paraventricular nucleus of the thalamus, caudal region |
| rPVT | Paraventricular nucleus of the thalamus, rostral region |
| RCH | Retrochiasmatic area |
| RE | Reuniens nucleus of the thalamus |
| RH | Rhomboid nucleus of the thalamus |
| RR | Retrorubral area |
| RSP | Retrosplenial cortical area |
| RSPagl | Retrosplenial cortical area, agranular part |
| RSPd | Retrosplenial cortical area, dorsal part |
| RSPv | Retrosplenial cortical area, ventral part |
| RT | Reticular nucleus of the thalamus |
| SC | Superior colliculus |
| SI | Substantia innominata |
| sm | Stria medullaris |
| SN | Substantia nigra |
| SNc | Substantia nigra, compact part |
| SNr | Substantia nigra reticular part |
| SPFp | Subfascicular nucleus, parvocellular part |
| SSp | Primary somatosensory cortical area |
| SSp m | Primary somatosensory cortical area, mouth region |
| SSs | Supplementary somatosensory cortical area |
| SUB | Subiculum |
| SUBd | Subiculum, dorsal part |
| SUBv | Subiculum, ventral part |
| SUBv_m | Subiculum, ventral part, molecular layer |
| SUBv_sp | Subiculum, ventral part, pyramidal layer |
| SUBv_sr | Subiculum, ventral part, stratum radiatum |
| TEa | Temporal association cortical area |
| cTEa | Temporal association cortical area, caudal region |
| rTEa | Temporal association cortical area, rostral region |
| TM | Tuberomammillary nucleus |
| TMd | Tuberomammillary nucleus, dorsal part |
| TMv | Tuberomammillary nucleus, ventral part |
| TR | Postpiriform transition area |
| TT | Taenia tecta |
| TTd | Taenia tecta, dorsal part |
| TTv | Taenia tecta, ventral part |
| TU | Tuberal nucleus |
| VIS | Visual cortical area |
| VISal | Anterolateral visual cortical area |
| VISam | Anteromedial visual cortical area |
| VISl | Lateral visual cortical area |
| VISp | Primary visual cortical area |
| VISC | Visceral cortical area |
| VLPO | Ventrolateral preoptic nucleus |
| VMH | Ventromedial hypothalamic nucleus |
| VMHd | Ventromedial hypothalamic nucleus, dorsal part |
| VP | Ventral pallidum |
| VPMpc | Ventral posteromedial nucleus of the thalamus, parvocellular part |
Lower case, italicized acronyms denote fiber tracts.