Table 3. Structural quality control parameters for the homology model.
The QMEAN4 index has a score is between the range (0–1) that indicates good quality in the model and the GQME index is expressed as a number between 0 and 1. Higher numbers indicate greater reliability.
PARAMETERS | |||||||
---|---|---|---|---|---|---|---|
PROTEINS | Ramachandran
favoured |
GMQE | QMEAN4 | Cβ | All
Atom |
Solvation | Torsion |
Api c 1 | 97.93% | 0.67 | -3.02 | -2.28 | -0.40 | 0.54 | -2.81 |
Api m 1 | 96.21% | 0.16 | -1.58 | -0.48 | 0.53 | -1.89 | -0.91 |
Bom p 1 | 96,27% | 0.77 | -2.85 | -0.97 | -1.52 | -1.18 | -2.40 |
Bom t 1 | 97,39% | 0.78 | -2.85 | -0.25 | -1.80 | -0.74 | -2.69 |
Pol a 1 | 83,96% | 0.33 | -6.49 | -3.17 | -3.20 | -2.02 | -5.03 |
Pol d 1 | 90,41% | 0.64 | -1.97 | 0.32 | -0.96 | 0.96 | -2.47 |
Poly p 1 | 91,19% | 0.31 | -2.05 | 0.46 | -1.41 | 0.94 | -2.54 |
Vesp c 1 | 92,91% | 0.96 | -1.23 | 0.18 | -1.08 | 0.53 | -1.49 |
Dol m 1 | 90,17% | 0.81 | -1.98 | 1.16 | -0.87 | 0.86 | -2.61 |
Ves v 1 | 90,82% | 0.78 | -1.42 | 0.98 | -0.78 | 0.82 | -1.97 |
Ves m 1 | 91,16% | 0.88 | -1.20 | 0.87 | -0.78 | 0.95 | -1.75 |
Sol i 1 | 87,06% | 0.56 | -4.91 | -1.91 | -2.20 | -0.26 | -4.79 |
Sol i 2 | 99,12% | 0.88 | 0.23 | 0.85 | 1.20 | 0.80 | -0.35 |
Sol s 2 | 99,12% | 0.76 | 0.06 | 0.99 | 0.85 | 1.33 | -0.76 |
Culex quinquefasciatus | 91,07% | 0.43 | -2.85 | -0.53 | -1.58 | -1.08 | -2.36 |
Centruroides hentzi | 89.74% | 0.64 | -4.75 | -2.76 | -2.82 | -0.28 | -1.88 |
Parasteatoda tepidariorum | 91.60% | 0.54 | -2.70 | -2.24 | -1.85 | -4.26 | -1-69 |