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. Author manuscript; available in PMC: 2022 Jan 15.
Published in final edited form as: ACS Synth Biol. 2020 Dec 30;10(1):132–144. doi: 10.1021/acssynbio.0c00500

Table 1.

List of strains and plasmids used in this study

Strains Genotype Reference
XL 1-Blue recA1 endA1gyrA96thi-1hsdR17supE44relA1lac [F’ proAB lacIqZDM15n1O (TetR)] Stratagene
BW25113(F’) rrnBT14 ΔlacZWJ16 hsdR514 ΔaraBADAH33 ΔrhaBADLD78 F’ [traD36 proAB lacIqZΔM15 Tn10(Tetr)] Yale
CGSC
Plasmids Description Reference
pZE12-luc pLlacO-1; luc; ColE1 ori; AmpR 20
pCS27 pLlacO-1; p15A ori; KanR 21
pZE-PpadC-egfp pZE12-luc carrying PpadC from Bacillus subtilis and egfp In this study
pZE-PpadC-yveF-egfp pZE12-luc carrying PpadC and yveF from Bacillus subtilis and egfp In this study
pZE-Ppadc-yveG-egfp pZE12-luc carrying PpadC and yveG from Bacillus subtilis and egfp In this study
pZE-PpadC-yveF-yveG-egfp pZE12-luc carrying PpadC and yveF and yveG from Bacillus subtilis and egfp In this study
pCS-lpp1.0-PadR pCS27 carrying promoter lpp1.O and PadR from Bacillus subtilis In this study
pCS-lpp0.8-PadR pCS27 carrying promoter lpp0.8 and PadR from Bacillus subtilis In this study
pCS-lpp0.5-PadR pCS27 carrying promoter lpp0.5 and PadR from Bacillus subtilis In this study
pCS-lpp0.2-PadR pCS27 carrying promoter lpp0.2 and PadR from Bacillus subtilis In this study
pCS-lpp0.2-K37A pCS27 carrying promoter lpp0.2 and PadR mutant K37A from Bacillus subtilis In this study
pCS-lpp0.2-H38A pCS27 carrying promoter lpp0.2 and PadR mutant H38A from Bacillus subtilis In this study
pCS-lpp0.2-S39A pCS27 carrying promoter lpp0.2 and PadR mutant S39A from Bacillus subtilis In this study
pCS-lpp0.2-Q40A pCS27 carrying promoter lpp0.2 and PadR mutant Q40A from Bacillus subtilis In this study
pCS-lpp0.2-Q61A pCS27 carrying promoter lpp0.2 and PadR mutant Q61A from Bacillus subtilis In this study
pCS-lpp0.2-K64A pCS27 carrying promoter lpp0.2 and PadR mutant K64A from Bacillus subtilis In this study
pZE-P1-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P1, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P2-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P2, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P3-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P3, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P4-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P4, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P5-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P5, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P6-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P6, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P7-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P7, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P8-yveF-yveG-egfp pZE12-/wc carrying PpadC mutant P8, and yveF andyveG from Bacillus subtilis and egfp In this study
pZE-P9-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P9, and yveF andyveG from Bacillus subtilis and egfp In this study
pZE-P10-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P10, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P11-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P11, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P12-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P12, andyveF and yveG from Bacillus subtilis and egfp In this study
pZE-P13-yveF-yveG-egfp pZE12-luc carrying PpadC mutant P13, and yveF and yveG from Bacillus subtilis and egfp In this study
pZE-P1-egfp pZE12-luc carrying PpadC mutant P1 and egfp In this study
pZE-P2-egfp pZE12-luc carrying PpadC mutant P2 and egfp In this study
pZE-P3-egrp pZE12-luc carrying PpadC mutant P3 and egfp In this study
pZE-P4-egfp pZE12-luc carrying PpadC mutant P4 and egfp In this study
pZE-P5-egfp pZE12-luc carrying PpadC mutant P5 and egfp In this study
pZE-P6-egfp pZE12-luc carrying PpadC mutant P6 and egfp In this study
pZE-P7-egfp pZE12-luc carrying PpadC mutant P7 and egfp In this study
pZE-P8-egfp pZE12-luc carrying PpadC mutant P8 and egfp In this study
pZE-P9-egfp pZE12-luc carrying PpadC mutant P9 and egfp In this study
pZE-P10-egfp pZE12-luc carrying PpadC mutant P10 and egfp In this study
pZE-P11-egfp pZE12-luc carrying PpadC mutant P11 and egfp In this study
pZE-P12-egfp pZE12-luc carrying PpadC mutant P12 and egfp In this study
pZE-P13-egfp pZE12-luc carrying PpadC mutant P13 and egfp In this study
pSC-lpp1.0-yveF-yveG pCS27 carrying lpp1.0, yveF, and yveG In this study