Table 4.
Comparison of partial charges and LJ parameters for C36/LJ-PME and C36.
atom | C36 | C36/LJ-PME |
---|---|---|
partial charges (e): PC lipids | ||
C2 | 0.17 | 0.1339 |
HS | 0.09 | 0.1023 |
O21 | −0.49 | −0.4739 |
C21 | 0.90 | 0.8445 |
O22 | −0.63 | −0.6272 |
C22 | −0.22 | −0.1652 |
H2R | 0.09 | 0.0928 |
H2S | 0.09 | 0.0928 |
C3 | 0.08 | 0.0302 |
HX | 0.09 | 0.1030 |
HY | 0.09 | 0.1030 |
O31 | −0.49 | −0.4739 |
C31 | 0.90 | 0.8445 |
O32 | −0.63 | −0.6272 |
C32 | −0.22 | −0.1652 |
H2X | 0.09 | 0.0928 |
H2Y | 0.09 | 0.0928 |
Rmin/2 (Å): PC lipids | ||
O21 | 1.65 | 1.6809 |
O22 | 1.70 | 1.6470 |
O31 | 1.65 | 1.6809 |
O32 | 1.70 | 1.6470 |
ε (kcal/mol): PC lipids | ||
O22 | −0.120 | −0.1192 |
O32 | −0.120 | −0.1192 |