Table 4.
Comparison of partial charges and LJ parameters for C36/LJ-PME and C36.
| atom | C36 | C36/LJ-PME |
|---|---|---|
| partial charges (e): PC lipids | ||
| C2 | 0.17 | 0.1339 |
| HS | 0.09 | 0.1023 |
| O21 | −0.49 | −0.4739 |
| C21 | 0.90 | 0.8445 |
| O22 | −0.63 | −0.6272 |
| C22 | −0.22 | −0.1652 |
| H2R | 0.09 | 0.0928 |
| H2S | 0.09 | 0.0928 |
| C3 | 0.08 | 0.0302 |
| HX | 0.09 | 0.1030 |
| HY | 0.09 | 0.1030 |
| O31 | −0.49 | −0.4739 |
| C31 | 0.90 | 0.8445 |
| O32 | −0.63 | −0.6272 |
| C32 | −0.22 | −0.1652 |
| H2X | 0.09 | 0.0928 |
| H2Y | 0.09 | 0.0928 |
| Rmin/2 (Å): PC lipids | ||
| O21 | 1.65 | 1.6809 |
| O22 | 1.70 | 1.6470 |
| O31 | 1.65 | 1.6809 |
| O32 | 1.70 | 1.6470 |
| ε (kcal/mol): PC lipids | ||
| O22 | −0.120 | −0.1192 |
| O32 | −0.120 | −0.1192 |