Skip to main content
. 2021 Jan 19;2(3):100164. doi: 10.1016/j.xplc.2021.100164

Figure 4.

Figure 4

AvrXa7 and PthXo3 are predicted to target two overlapping EBEs in Xa7.

(A) Individual RVDs of the AvrXa7 and PthXo3 central repeats match single nucleotides of the predicted EBE regions in the Xa7 promoter. Single letters are used for amino acids at the 12th and 13th positions of individual repeats. ∗ The missing amino acid at the 13th position of a particular repeat. The EBE regions for AvrXa7 and PthXo3 in the S gene SWEET14 are shown for comparison.

(B) The scores of matches between the DNA sequences of putative Xa7 and SWEET14 (as controls) and the repeats of AvrXa7 and PthXo3 as predicted by two programs (TALE-NT and TALVEZ). A lower score indicates a higher binding affinity between the RVDs and the target sequence.