Table 2.
Common consensus mutations shared between putative source-recipient pairs in the CH1 outbreak.
| Source | Recipient |
|---|---|
| P3 (C241T, C3037T, C14408T, A23403G) | P7 (C241T, C3037T, C14408T, A23403G) |
| P10 (C241T, C3037T, C14408T, A23403G) | |
| HW4 (C241T, C3037T, C14408T, A23403G) | |
| P22 (C241T, C3037T, C14408T, C16376T, A23403G) | |
| P5 (C241T, C3037T, C14408T, C16376T, A23403G) | |
| P20 (C241T, C3037T, C14408T, C16376T, A23403G) | |
| P27 (C241T, C3037T, C14408T, C16376T, A23403G) | |
| P29 (C241T, C3037T, C14408T, C16376T, A23403G) | |
| HW4 (C241T, C3037T, C14408T, A23403G) | P11 (C241T, C3037T, C14408T, A23403G) |
| P15 (C241T, C3037T, C14408T, A23403G) | |
| P7 (C241T, C3037T, C14408T, A23403G) | P23 (C241T, C3037T, C14408T, C16376T, A23403G) |
| X1 (C241T, C2997T, C3037T, C14408T, A23403G) | |
| P26 (C241T, C3037T, C14408T, C16376T, A16561C, A23403G) |
Mutations in bold were present in the recipient but not in the source. SNP distances between the genomes were confirmed using snp-dists package. Mutations were called relative to the Wuhan-Hu-1 reference (NC044512.2).