Table 4.
Chryseobacterium sp. CHNTR56 MYb120 | Sphingobacterium faecium MYb181 | Comamonas sp. 12022 MYb131 | Achromobacter sp. F32 MYb9 | E. coli OP50 |
---|---|---|---|---|
dxs | dxs_1 | dxs_1 | dxs_1 | dxs_1 |
_ | dxs_2 | dxs_2 | dxs_2 | dxs_2 |
dxs_3 | ||||
pdxJ_1 | pdxJ | pdxJ | pdxJ | pdxJ |
pdxJ_2 | _ | _ | _ | _ |
pdxH | pdxH | pdxH | pdxH | pdxH |
pdxB_1 | _ | pdxB | _ | pdxB |
pdxB_2 | _ | _ | _ | _ |
serC_1 | serC | serC | serC | serC_1 |
serC_2 | _ | _ | _ | serC_2 |
serC_3 | _ | _ | _ | _ |
serC_4 | _ | _ | _ | _ |
pdxA_1 | pdxA2 | pdxA2_1 | pdxA2_1 | pdxA |
pdxA_2 | _ | pdxA2_2 | pdxA2_2 | _ |
_ | _ | pdxA2_3 | pdxA2_3 | _ |
gapA | gapA_1 | gapA | _ | gapA_1, epd_1 |
_ | gapA_2 | _ | _ | gapA_2, epd_2 |
_ | _ | pdxKǂ | pdxKǂ | pdxKǂ |
_ | _ | pdxYǂ | _ | pdxYǂ |
Multiple homologs in the specific route of de novo vitamin B6 pathway (D-erythrose 4-P is converted to 3-amino-1-hydroxyacetone 1-P4) for Chryseobacterium sp. CHNTR56 MYb120 (serC_1–4) and Comamonas sp. 12022 MYb131 (pdxA2_1–3) are present, which are indicated with bold. ǂ: Salvage pathway