Table 1.

Single-cell analysis databases

Definition	Resource	Target disease	Species	Cell number	Platform
Single-cell atlas from healthy mouse kidneys [6]	http://susztaklab.com/sc	Normal	Mouse	57,979	10× Genomics
Single-cell atlas of the mouse glomeruli [69]	https://shiny.mdc-berlin.de/mgsca/	Normal	Mouse	~13,000	Drop-seq
Single-cell RNA sequencing for each collecting duct type [70]	https://hpcwebapps.cit.nih.gov/ESBL/Database/scRNA-Seq/alpha-fraction.html	Normal	Mouse	235	Fluidigm C1
Profiling kidney cell by lineage, gender, zonation [71]	https://cello.shinyapps.io/kidneycellexplorer/	Normal	Mouse	31,265	10× Genomics
Single-cell RNA sequencing of human kidney [72]		Normal	Human	23,366	10× Genomics
Profiling of human kidney development by single-cell RNA sequencing [73]		Kidney development	Human	~3,000	STRT-seq
Inflammatory response in transplantation kidney [74]	http://humphreyslab.com/SingleCell/	Transplantation	Human	4,487	InDrops
Single nucleus RNA sequencing of human kidney [7]		Normal	Human	17,659 (nuclei)	Drop-seq
Single-cell atlas of the human kidney’s immune system from mature and fetal kidneys [76]	https://www.kidneycellatlas.org/	Normal	Human	67,471	10× Genomics
Human kidney cell atlas by Mux-seq [77]		Normal	Human	45,000	10× Genomics
Single-cell RNA sequencing from patients with lupus nephritis [78]		Lupus nephritis	Human	4,019	Fluidigm C1
Kidney immune cell profiling by single-cell RNA sequencing in patients with lupus nephritis [79]	https://immunogenomics.io/ampsle/	Lupus nephritis	Human	8,455	CEL-seq2
Single-cell atlas of the human diabetes kidney [80]	http://humphreyslab.com/SingleCell/	Diabetes	Human	23,980 (nuclei)	10× Genomics
Single-cell RNA sequencing of mouse glomeruli with diabetes [81]		Diabetes	Mouse	644	Fluidigm C1
Single-cell RNA sequencing from UUO mouse model [82]	https://argonaut.is.ed.ac.uk/shiny/katie.connor/mac_shiny/	UUO	Mouse	25,381	10× Genomics, SMART-seq2

UUO, unilateral ureteric obstruction.