Table 1.
Allele frequency at the 9 nucleotide positions that differentiate DENV2 16681 from PDK53.
| Position | Reference allele | Allele frequency (%) | Alternate allele | Allele frequency (%) | ||||
|---|---|---|---|---|---|---|---|---|
| Stock | P0 | P1 | Stock | P0 | P1 | |||
| 16681 | ||||||||
| 57 | C | 100% | 100% | 100% | U | 0% | 0% | 0% |
| 524 | A | 100% | 100% | 100% | U | 0% | 0% | 0% |
| 2055 | C | 100% | 100% | 100% | U | 0% | 0% | 0% |
| 2579 | G | 100% | 100% | 100% | A | 0% | 0% | 0% |
| 4018 | C | 100% | 100% | 100% | U | 0% | 0% | 0% |
| 5270 | A | 100% | 100% | 100% | U | 0% | 0% | 0% |
| 5547 | U | 100% | 100% | 100% | C | 0% | 0% | 0% |
| 6599 | G | 100% | 100% | 100% | C | 0% | 0% | 0% |
| 8571 | C | 89.03% | 100% | 100% | U | 10.97% | 0% | 0% |
| PDK53 | ||||||||
| 57 | U | 99.23% | 100% | 99.7% | C | 0.77% | 0% | 0.30% |
| 524 | U | 100% | 100% | 100% | A | 0% | 0% | 0% |
| 2055 | U | 100% | 100% | 100% | C | 0% | 0% | 0% |
| 2579 | A | 97.47% | 100% | 99.61% | G | 2.53% | 0% | 0.39% |
| 4018 | U | 97.87% | 100% | 99.86% | C | 2.13% | 0% | 0.14% |
| 5270 | U | 74.3% | 100% | 100% | A | 25.70% | 0% | 0% |
| 5547 | C | 100% | 100% | 100% | U | 0% | 0% | 0% |
| 6599 | C | 100% | 100% | 100% | G | 0% | 0% | 0% |
| 8571 | U | 100% | 100% | 100% | C | 0% | 0% | 0% |