TABLE 1.
The alignment scores computed for the PDB sequence 6DRX and 3NYA using a miss and gap score of −2.
| Target protein | Reference protein | 8DP BLOSUM min:−0.84 max: 0.73 | 8DP GPCRtm min:−0.83 max: 0.75 | 10DP BLOSUM min:−0.77 max: 0.66 | 10P GPCRtm min: −0.97 max: 0.66 |
| 5HT2B/H8G (PDB ID: 6DRX) | ADRB2/JTZ (PDB ID: 3NYA) | 0.39 | 0.4 | 0.54 | 0.46 |
| ADRB2/JTZ (PDB ID: 3NYA) | 5HT2B/H8G (PDB ID: 6DRX) | 0.36 | 0.37 | 0.52 | 0.43 |
The highest and lowest values for each profiling scoring function obtained by aligning all the diverse GPCRs available in the PDB databank are also reported.