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. 2021 May 20;22:158. doi: 10.1186/s13059-021-02373-4

Table 4.

Spearman correlation gap for WGAN-GP, InfoWGAN-GP, PCA, MichiGAN-PCA, VAE, -TCVAE, and MichiGAN on the two splatter-simulated single-cell RNA-seq datasets

Model Linear step Non-linear step
WGAN-GP 0.07 0.02 0.10 0.06
InfoWGAN-GP 0.05 0.05 0.04 0.02
PCA 0.68 0.00 0.72 0.00
MichiGAN-PCA 0.65 0.01 0.68 0.00
VAE 0.3 0.04 0.27 0.07
-TCVAE 0.18 0.05 0.16 0.06
MichiGAN 0.18 0.04 0.15 0.05

The mean and standard deviation are presented for each method over 5 runs