TABLE 2.
Primers used in this study
| Target | Forward (5′–3′) | Reverse (5′–3′) | Application |
|---|---|---|---|
| RTA (−1.7 kb) | GATCGGCGAAGTGGATAGAGT | CCCTATTGGTCACATCTCACG | ChIP-qPCR |
| RTA (−1.4 kb) | TGAGGTCTATTTCCCACGACA | ACAGCTCCGACGATGAGTATG | ChIP-qPCR |
| RTA (−1.0 kb) | CCCCAACACAAGGACCTTTA | GCTTTTGGATACCCTGGTGA | ChIP-qPCR |
| RTA (−0.6 kb) | AAGACACTGACCCACCAAGG | GGTGCCACCAATGTATGACC | ChIP-qPCR |
| RTA (−0.1 kb) | AAAGTCAACCTTACTCCGCAAG | GCTGCCTGGACAGTATTCTCAC | ChIP-qPCR |
| RTA (+0.8 kb) | TTGCCAAGTTTGTACAACTGCT | ACCTTGCAAAGACCATTCAGAT | ChIP/RT-qPCR |
| Neg | CAGGATCTCCGAGAATCAGC | GAGTTGGGAGAGCTGTCAGG | ChIP-qPCR |
| K2pr | CATACGCAGCCAAGCTATCA | GCTAGCACAGCAAATTGAGA | ChIP-qPCR |
| K2gb | TCACTGCGGGTTAATAGGATTT | CATGACGTCCACGTTTATCACT | ChIP/RT-qPCR |
| ORF25pr | AGTTGTCGGTGTCTATCTGT | TGCAGAGCGATACGCAGACT | ChIP-qPCR |
| ORF25gb | ACAGTTTATGGCACGCATAGTG | GGTTCTCTGAATCTCGTCGTGT | ChIP/RT-qPCR |
| ORF11 | GGCACCCATACAGCTTCTACGA | CGTTTACTACTGCACACTGCA | qPCR |
| HS1 | TTCCTATTTGCCAAGGCAGT | CTCTTCAGCCATCCCAAGAC | qPCR |
| ORF57 | AGGGATATCACCGCTCTCATAAGA | CTGCGGTTTCTCGACGGCAACTCA | RT-qPCR |
| ORF42 | CTGGTGGAGCACGAAGACAT | CGATAACAGGCAGCAGAGCT | RT-qPCR |
| ORF64 | CTTCCTCGAGGGCATCATATAC | TATACGGTGATGGACTTGATGG | RT-qPCR |
| LANA | GAGTCTGGTGACGACTTGGAG | AGGAAGGCCAGACTCTTCAAC | RT-qPCR |
| RTA | CAAGGTGTGCCGTGTAGAGAT | GGTCAAAGCCTTACGCTTCTT | RT-qPCR |
| KDM2B | AGTCCGAGACGTCAAACTCCTA | TAGTAACGCACAAACTGGGACA | RT-qPCR |
| SKP1 | GATGATGACCCAGTTCCTCTAC | CAAACAGGGATATCATCTGTTCG | RT-qPCR |
| CUL1 | CATTGGGTTCGCCGTGAATGTGAC | TACAACTCCACTAATCAATCTTGT | RT-qPCR |
| c-Fos | CATGGGCTCGCCTGTCAACGCGCA | GGTGAGGGGCTCTGGTCTGCGATG | RT-qPCR |
| c-Jun | AGCGCCTGATAATCCAGTCCAGCA | ACGTGACGCTGGGCAGCGTGTTCT | RT-qPCR |
| IL-6 | ATGTAACAAGAGTAACATGTGTGA | AGTGATGATTTTCACCAGGCAAGT | RT-qPCR |
| 18S | TTCGAACGTCTGCCCTATCAA | GATGTGGTAGCCGTTTCTCAGG | RT-qPCR |