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. 2021 May 10;95(11):e02305-20. doi: 10.1128/JVI.02305-20

TABLE 2.

RG fold change and stability parameters of the six tested RGs in CD4+ T cellsa

Condition RG 6h
24h
Fold change
geNorm M BestKeeper SD Fold change
geNorm M BestKeeper SD
Mean Upper 90% CI Lower 90% CI Mean Upper 90% CI Lower 90% CI
PHA/DMSO TBP 1.08 1.27 0.93 0.30 0.13 1.55 1.87 1.29 0.55 0.32
RPL27A 0.98 1.11 0.86 0.34 0.10 1.48 1.90 1.15 0.58 0.28
UBE2D2 1.22 1.45 1.03 0.30 0.16 2.26 2.76 1.86 0.56 0.59
HPRT1 2.18 2.41 1.97 0.58 0.56 4.08 5.37 3.09 0.64 1.01
YWHAZ 0.84 1.08 0.66 0.42 0.18 2.06 2.27 1.87 0.53 0.52
GAPDH 1.71 2.09 1.40 0.41 0.42 7.57 10.73 5.35 1.01 1.46
PMAi/DMSO TBP 1.39 1.55 1.25 0.83 0.25 2.96 3.38 2.59 0.64 0.78
RPL27A 1.06 1.06 1.05 0.81 0.14 1.86 2.03 1.70 0.81 0.45
UBE2D2 0.77 0.90 0.66 0.91 0.23 4.16 4.92 3.51 0.69 1.03
HPRT1 5.31 6.35 4.44 1.58 1.20 7.35 10.98 4.92 0.83 1.44
YWHAZ 0.10 0.11 0.08 2.17 1.68 1.32 1.75 1.00 0.99 0.23
GAPDH 1.65 2.01 1.36 0.92 0.43 12.18 16.91 8.76 1.12 1.80
VOR/DMSO TBP 1.00 1.13 0.90 0.17 0.18 0.92 1.02 0.84 0.26 0.07
RPL27A 1.01 1.14 0.89 0.23 0.13 1.05 1.20 0.91 0.20 0.10
UBE2D2 1.24 1.33 1.16 0.21 0.25 1.19 1.40 1.01 0.32 0.17
HPRT1 1.09 1.22 0.98 0.25 0.31 1.14 1.20 1.09 0.22 0.18
YWHAZ 1.00 1.17 0.85 0.20 0.25 1.02 1.06 0.97 0.21 0.12
GAPDH 1.25 1.44 1.08 0.22 0.33 1.58 1.77 1.41 0.37 0.35
ROM/DMSO TBP 0.70 0.79 0.63 0.30 0.26 1.27 1.54 1.05 0.46 0.21
RPL27A 0.97 1.06 0.88 0.24 0.17 0.99 1.11 0.89 0.46 0.08
UBE2D2 0.99 1.12 0.87 0.23 0.20 0.92 1.02 0.84 0.55 0.16
HPRT1 0.78 0.87 0.69 0.36 0.34 1.25 1.42 1.10 0.48 0.24
YWHAZ 0.98 1.06 0.90 0.22 0.23 0.32 0.34 0.29 1.11 0.83
GAPDH 1.01 1.14 0.89 0.27 0.31 2.49 2.97 2.10 0.86 0.66
PEP005/DMSO TBP 1.01 1.06 0.95 0.43 0.16 1.06 1.15 0.98 0.45 0.07
RPL27A 0.89 1.07 0.74 0.51 0.17 1.06 1.18 0.95 0.45 0.06
UBE2D2 1.47 1.79 1.21 0.38 0.28 1.70 2.12 1.37 0.44 0.38
HPRT1 2.01 2.48 1.62 0.49 0.50 1.50 1.75 1.29 0.38 0.30
YWHAZ 1.17 1.34 1.02 0.39 0.26 1.53 1.89 1.24 0.38 0.33
GAPDH 3.05 3.71 2.51 0.74 0.81 3.61 4.69 2.78 0.81 0.93
AZD/DMSO TBP 0.92 1.07 0.79 0.17 0.17 0.97 1.07 0.87 0.17 0.06
RPL27A 0.96 1.10 0.84 0.20 0.16 0.98 1.11 0.86 0.16 0.10
UBE2D2 0.92 1.21 0.70 0.19 0.24 1.00 1.12 0.89 0.30 0.12
HPRT1 0.82 0.94 0.71 0.31 0.24 1.00 1.26 0.79 0.20 0.22
YWHAZ 0.89 1.01 0.79 0.18 0.24 0.99 1.08 0.90 0.16 0.13
GAPDH 0.98 1.12 0.86 0.24 0.30 1.04 1.18 0.92 0.17 0.17
IBET/DMSO TBP 0.89 1.01 0.79 0.30 0.14 0.85 1.04 0.70 0.19 0.16
RPL27A 0.92 1.17 0.73 0.29 0.22 0.89 1.01 0.79 0.19 0.12
UBE2D2 0.95 1.19 0.76 0.25 0.25 1.00 1.20 0.84 0.32 0.15
HPRT1 0.93 1.20 0.71 0.28 0.29 0.84 1.00 0.71 0.24 0.22
YWHAZ 0.50 0.63 0.39 0.54 0.55 0.70 0.79 0.62 0.28 0.26
GAPDH 1.11 1.21 1.02 0.34 0.30 1.14 1.23 1.06 0.30 0.16
STINGa/DMSO TBP 0.85 0.87 0.82 0.33 0.18 0.81 0.95 0.70 0.25 0.15
RPL27A 0.81 0.96 0.68 0.33 0.22 0.67 0.80 0.56 0.19 0.29
UBE2D2 0.65 0.70 0.59 0.28 0.33 0.77 0.85 0.71 0.31 0.24
HPRT1 0.75 0.86 0.65 0.32 0.31 0.65 0.77 0.54 0.20 0.31
YWHAZ 0.39 0.44 0.35 0.54 0.68 0.61 0.67 0.55 0.22 0.36
GAPDH 0.63 0.73 0.55 0.33 0.41 0.56 0.74 0.42 0.29 0.42
a

Related to Fig. 2B. RG fold change expressed as average and 90% CI upper and lower limits under LRA conditions relative to that in DMSO in CD4+ T cells (n = 4) after 6 h and 24 h. M stability value of geNorm and SD value of BestKeeper in data set composed of two conditions (DMSO plus one LRA) from CD4+ T cells after 6 h or after 24 h. Fold change of >2 or <0.5, M value of >1.5, and SD of >1 indicate unstable RGs (highlighted in boldface font).