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. Author manuscript; available in PMC: 2022 May 20.
Published in final edited form as: J Phys Chem A. 2021 Mar 30;125(19):4216–4232. doi: 10.1021/acs.jpca.1c00736

Table 1:

Selected stationary points from the glycine, alanine, and valine dipeptide free energy surfaces shown in Fig. 4.

Label vFEP (B-spline) MBAR (B-spline) vFEP (Cubic)
Φ
Deg.
ψ
Deg.
ΔG
kcal/mol
Φ
Deg.
ψ
Deg.
ΔG
kcal/mol
Φ
Deg.
ψ
Deg.
ΔG
kcal/mol
Glycine
(1) 68.9 206.8 0.03 67.9 203.1 0.05 66.6 206.3 −0.05
(1–2) 122.7 179.1 1.65 125.8 182.2 1.58 124.3 170.2 1.44
(2) 181.0 181.7 0.60 183.8 177.6 0.54 182.7 181.1 0.80
(2–3) 235.1 170.7 1.69 235.0 169.0 1.64 234.5 173.3 1.83
(3) 287.8 168.2 0.00 288.7 164.6 0.00 287.8 169.8 0.00
Alanine
(1) 52.4 32.7 0.81 52.9 33.6 0.73 52.8 33.6 1.42
(1–2) 59.2 112.3 4.45 58.9 111.6 4.37 59.2 112.3 5.08
(2) 61.0 168.4 2.76 60.7 163.5 2.75 60.9 170.8 3.37
(2–3) 127.4 150.0 13.20 127.5 149.3 13.06 127.1 150.6 13.69
(3) 211.3 158.3 0.88 210.8 157.9 0.81 212.3 157.0 1.40
(3–4) 243.7 156.1 1.63 244.5 155.9 1.57 241.5 157.6 1.95
(4) 291.9 154.0 0.00 292.3 152.6 0.00 292.7 153.2 0.00
Valine
(1) 55.6 49.9 1.92 55.9 49.4 1.98 55.4 50.7 2.80
(1–2) 59.4 98.0 2.80 59.5 98.5 2.88 59.7 100.5 3.67
(2) 65.0 128.5 2.46 65.1 129.2 2.59 66.1 127.9 3.45
(2–3) 135.1 134.0 14.56 135.6 133.2 14.62 135.4 132.6 15.14
(3) 292.2 133.0 0.00 292.3 133.5 0.00 293.4 133.9 0.00