Table 1.
Data statistics in RPGD database
| Data type | Number |
|---|---|
| Gene | |
| Genes for R. delavayi | 32,938 |
| Genes for R. williamsianum | 23,559 |
| Genes for R. simsii | 32,999 |
| Genome | |
| Scaffolds for R. delavayi | 193,091 |
| Chromosomes for R. williamsianum | 13 |
| Chromosomes for R. simsii | 13 |
| Gene ontology (GO) | |
| R. delavayi | |
| Genes | 21,361 |
| Annotations | 805,276 |
| R. williamsianum | |
| Gene | 17,658 |
| Annotations | 687,600 |
| R. simsii | |
| Genes | 22,235 |
| Annotations | 785,704 |
| Gene Family | |
| Gene families for R. delavayi | 4168 |
| Gene families for R. williamsianum | 3546 |
| Gene families for R. simsii | 3742 |
| Transcription factor (TF) and Transcriptional regulators (TRs) | |
| TFs and TRs for R. delavayi | 2104 |
| TFs and TRs for R. williamsianum | 1622 |
| TFs and TRs for R. simsii | 2156 |
| Simple sequence repeat (SSR) | |
| SSRs for R. delavayi | 361,268 |
| SSRs for R. williamsianum | 230,013 |
| SSRs for R. simsii | 358,705 |
| Chloroplast genome assemblies | |
| R. delavayi chloroplast genome assembly | 2 |
| R. pulchrum chloroplast genome assembly | 1 |
| InterPro | |
| Annotated to InterPro for R. delavayi | 77,221 |
| Annotated to InterPro for R. williamsianum | 60,834 |
| Annotated to InterPro for R. simsii | 81,654 |
| Gene expression | |
| RNA-Seq for R. delavayi | 2 |
| Genomic synteny | 2913 |
| OrthoFinder orthologous/paralogs group | 18,048 |