Table 2.
List of bonding interactions between selected four phytochemical with gag protein.
| PubChem CID | Residue | Distance | Category | Type |
|---|---|---|---|---|
| CID244297 | ALA364 | 5.30689 | Hydrogen Bond | Conv-H-Bond |
| ILE240 | 5.20546 | Hydrophobic | Alkyl | |
| PRO369 | 5.03758 | Hydrophobic | Alkyl | |
| ILE240 | 4.10592 | Hydrophobic | Alkyl | |
| ILE342 | 4.27502 | Hydrophobic | Alkyl | |
| PHE365 | 4.58263 | Hydrophobic | Pi-Alkyl | |
| CID6897 | GLY418 | 2.86383 | Hydrogen Bond | Conv-H-Bond |
| PRO420 | 3.47712 | Hydrogen Bond | C-H Bond | |
| LYS56 | 4.6933 | Hydrophobic | Alkyl | |
| LYS56 | 4.99136 | Hydrophobic | Alkyl | |
| LYS368 | 5.21921 | Hydrophobic | Alkyl | |
| LYS368 | 5.05134 | Hydrophobic | Alkyl | |
| LEU415 | 5.22063 | Hydrophobic | Alkyl | |
| MET416 | 5.23747 | Hydrophobic | Alkyl | |
| PRO420 | 4.55835 | Hydrophobic | Alkyl | |
| PRO420 | 5.075 | Hydrophobic | Alkyl | |
| LEU415 | 5.47725 | Hydrophobic | Alkyl | |
| LEU415 | 4.82065 | Hydrophobic | Alkyl | |
| ILE427 | 4.51538 | Hydrophobic | Alkyl | |
| LEU415 | 5.46433 | Hydrophobic | Alkyl | |
| MET416 | 5.07033 | Hydrophobic | Alkyl | |
| LEU63 | 4.86074 | Hydrophobic | Alkyl | |
| CID12303662 | VAL346 | 4.68285 | Hydrogen Bond | Conv-H-Bond |
| PHE365 | 4.64493 | Hydrogen Bond | Conv-H-Bond | |
| PRO369 | 4.52399 | Hydrophobic | Alkyl | |
| PRO369 | 5.17641 | Hydrophobic | Alkyl | |
| ILE240 | 4.62631 | Hydrophobic | Alkyl | |
| PRO369 | 4.03084 | Hydrophobic | Alkyl | |
| ILE240 | 4.36608 | Hydrophobic | Alkyl | |
| ILE342 | 4.65569 | Hydrophobic | Alkyl | |
| ILE342 | 3.93691 | Hydrophobic | Alkyl | |
| ILE240 | 4.59804 | Hydrophobic | Alkyl | |
| ILE342 | 4.80551 | Hydrophobic | Alkyl |