ART	Antiretroviral therapy
CGI	CpG island, (5′ Cytosine—phosphate—Guanine 3′)
CpG	5′ Cytosine—phosphate—Guanine 3′
CpH	5′ Cytosine—phosphate—Adenine, Cytosine or Thymine 3′
dUpH	deoxyuridine—phosphate—Adenine, Cytosine or Thymine
gDNA	Genomic deoxyribonucleic acid
HIV-1	Human Immunodeficiency Virus Type 1
LNMC	Lymph node mononuclear cells
LTR	Long terminal repeat
PBMC	Peripheral blood mononuclear cells
PCR	Polymerase chain reaction
SG	Single genome
SGS	Single genome sequencing
U	Uricil