Table 6.
Cryptosporidium gp60 sequences from non-hominis and non-parvum Cryptosporidium species generated in this study.
| Species (No. of Patients) |
Subtype Family (No. of Patients) |
Subtype (No. of Patients) |
GenBank Acc. No. 1 | Origin of Infection (No of Patients) |
|---|---|---|---|---|
| C. meleagridis (8) | IIIb (3) | IIIbA23G1R1 (2) | KJ210606 (IIIbA23G1R1a) 2 | Indonesia (1) |
| KU852727 (IIIbA23G1R1c) | Malaysia (1) | |||
| IIIbA24G1R1 (1) | KU852729 | China (1) | ||
| IIIe (4) | IIIeA17G2R1 (2) | KU852726 | China (2) | |
| IIIeA19G2R1 (1) | KJ210620 2 | Uzbekistan (1) | ||
| IIIeA21G2R1 (1) | KU852728 | Indonesia (1) | ||
| IIIg (1) | IIIgA22G3R1 (1) | KU852730 | Nepal (1) | |
| C. cuniculus (5) | Va (1) | VaA19 (1) | KU852733 | Sweden (1) |
| Vb (4) | VbA20R2 (1) | KU852735 (VbA20R2b) | Sweden (1) | |
| VbA25R3 (1) | KU852731 | Spain (1) | ||
| VbA29R4 (1) | KU852734 | Sweden (1) | ||
| VbA31R4 (1) | KU852732 | Greece (1) | ||
| C. erinacei (2) | XIIIa (2) | XIIIaA23R12 (1) | KU852736 | Sweden (1) |
| XIIIaA24R9 (1) | KU852737 | Greece (1) | ||
| C. ubiquitum (2) | XIIa (2) | XIIa-1 (2) | KU852740 | Sweden (2) |
| C. viatorum (1) | XVa (1) | XVaA3b (1) | KP115937 3 | Kenya (1) |
| Cryptosporidium chipmunk genotype I (5) | XIVa (5) | XIVaA20G2T1 (5) | KP099089 | Sweden (5) |
| Cryptosporidium horse genotype (1) | VIc (1) | VIcA16 (1) | KU852738 | Kenya (1) |
| C. felis (4) 4 | XIXa (3) | XIXa-39 (1) | MH240852 4 | Indonesia (1) |
| XIXa-43 (1) | MH240856 4 | Sweden (1) | ||
| XIXa-68 (1) | MH240883 4,5 | Sweden (1) | ||
| XIXb (1) | XIXb-1 (1) | MH240901 4 | Sweden (1) | |
| C. suis (1) | XXVa (1) | XXVaR37 (1) | MH187875 | Lithuania (1) |
| C. ditrichi (1) 6 | gp60 PCR neg | Sweden (1) |
1 Sequences submitted to GenBank during this study are indicated in boldface type. Accession numbers in non-boldface type refer to reference sequences from GenBank. 2 isolates included in Stensvold et al., 2014 [23]; 3 isolate included in Stensvold et al., 2015 [22]; 4 isolates included in Rojas et al., 2020 [21]; 5 case described in Beser et al., 2015 [30]; 6 case described in Beser et al., 2020 [31].