TABLE 2.
The annotated PBP gene in Francisella species and subspecies using KEGG database.
| Francisella tularensis subsp. tularensis Schu S4 | Francisella tularensis subsp. holarctica LVS | Francisella tularensis subsp. novicida U112 | |
| Locus (KEGG orthology) name [E.C. number], other information | Locus (KEGG orthology) name [E.C. number], other information | Locus (KEGG orthology) name [E.C. number], other information | |
| Penicillin-binding protein 3 (PBP-3) | FTT_0697 (K03587) FtsI Peptidoglycan D,D-transpeptidase, cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] ftsI; peptidoglycan synthetase | FTL_1539 (K03587) cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] penicillin-binding protein (peptidoglycan synthetase) | FTN_0607 (K03587) cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] ftsI; cell division protein, peptidoglycan synthetase (PBP) |
| PBP-4 | FTT_1039 (K07259) serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] | dacB1; D-alanyl-D-alanine carboxypeptidase Uniprot Q5NG20 | FTL_1046 (K07259) Serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein) family protein | FTN_0917 (K07259) Serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] serine-type D-Ala-D-Ala carboxypeptidase |
| PBP-4 | No homolog found | FTL_1509 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | FTN_0635 (K07259) serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] serine-type D-Ala-D-Ala carboxypeptidase |
| PBP-5/6 | FTT_1029 (K07258) dacD, Serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D-alanyl-D-alanine carboxypeptidase | FTL_1060 (K07258) serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] | (GenBank) D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein) family protein | FTN_0907 (K07258) serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] |
| Penicillin-binding protein activator (LpoB) | FTT_1540c (K07337) penicillin-binding protein activator hypothetical protein | FTL_0571 (K07337) penicillin-binding protein activator, conserved hypothetical protein | FTN_1449 (K07337) penicillin-binding protein activator, conserved protein of unknown function |