Table 2.
Coordinates (in bp) of recA deletions in D. radiodurans reference wt chromosome II, located with DNAdiff program, and direct repeats found at breakpoints. Start and end of deletion are reported as starting at the beginning of the repeat found at breakpoint. Local DNA sequences surrounding the repeats at breakpoint sites are presented in Table S5.
| RecA isolate | Start of deletion (reference wt) | End of deletion (reference wt) | Length of deletion (bp) | Start of deletion (wt White et al. 1999) | End of deletion (wt White et al. 1999) | Repeat at breakpoints |
|---|---|---|---|---|---|---|
| S1 | 162,314 | 226,262 | 63,948 | 162,302 | 226,250 | CGAGTTCGCGC |
| S2 | 175,704 | 227,142 | 51,423 | 175,692 | 227,130 | CAGCC |
| R1 | 162,602 | 240,541 | 77,912 | 162,590 | 240,528 | CGCCC |
| R2 | 160,014 | 247,789 | 87,759 | 160,002 | 247,776 | CGATGG |
| R6 | 187,421 | 222,947 | 35,522 | 187,407 | 222,934 | GGCA |