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. 2020 Dec 13;37(8):1107–1114. doi: 10.1093/bioinformatics/btaa919

Table 3.

Run time and memory usage

Method Number of cells Run time Max. resident set size (kB)
CIDR 3000 00h05m50s 3 106 072
CIDR 20 000 10h09m22s 36 010 516
ILoReg 3000 01h15m32s 660 792
ILoReg 20 000 10h05m38s 13 916 804
RaceID3 3000 00h08m47s 3 038 620
RaceID3 20 000 37h56m31s 21 633 488
SC3 3000 05h37m04s 5 472 304
SC3 20 000 44h42m48s 29 116 792
Seurat 3000 00h00m58s 819 452
Seurat 20 000 00h04m47s 5 283 004