Table 1.
Sleeping Beauty (SB) | piggyBac (PB) | Tol2 | |
---|---|---|---|
Species of origin | Salmonid fish [21] | Cabbage looper moth | Medaka fish [29] |
Classification | Tc1/mariner superfamily [21] | PB superfamily | hAT superfamily [30] |
Transposable element | ~1.6 kb long | ~2.5 kb long | ~4.7 kb long |
Terminal regions | IR/DRs of ~ 230 bp | 35–63 bp with outer TIRs and inner subterminal IRs | 150–200 bp containing the TIRs and subterminal regions |
Transposase | 340 aa | 594 aa | 649 aa (most active isoform) |
Footprint | CAG [13] | None [84] | Variable [29] |
Target site preference | TA [36] | TTAA [84] | Weak consensus sequence TNA(C/G)TTATAA(G/C)TNA [101] |
Target site duplication | TA [13] | TTAA [84] | 8 bp [101] |
Activity in species | Various vertebrates | Vertebrates, insects, plants, yeast | Various vertebrates |
Efficiency in human cells | Comparable to retroviral vectors [44] | Comparable to retroviral vectors [85] | Lower than PB and SB [107] |
Cargo capacity | >100 kb [83] | >100 kb [83] | >100 kb [114] |
Overproduction inhibition | Yes [107] | To some extent [107] | Lower than PB and SB [107] |
Integration profile | Close-to-random [107] | Biased towards TSSs, CpG islands and DNaseI hypersensitivity sites [107] | Biased towards TSSs, CpG islands and DNaseI hypersensitivity sites [107] |
Most common parental plasmid | pT2 | pXL-BacII | pTol2, miniTol2 |
Most hyperactive transposase | hySB100X [45] | hyPB [85] | hTol2-M [101] |
Vectors for transposon delivery | Plasmid DNA, pFAR, MC, non-integrative viral vectors, nanoparticles |
Plasmid DNA, dbDNA, non-integrative viral vectors, nanoparticles |
Plasmid DNA |
Vectors for transposase delivery | Plasmid DNA, mRNA, SNIM RNA, recombinant protein (hsSB), non-integrative viral vectors, nanoparticles |
Plasmid DNA, mRNA, non-integrative viral vectors, nanoparticles |
Plasmid DNA, mRNA, recombinant protein (His-Tol2) |
Clinical trials | Yes | Yes | No |