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. 2021 May 26;21:611. doi: 10.1186/s12885-021-08368-5

Table 2.

List of pathogenic and likely pathogenic variants identified

Gene Transcript cDNA change Protein change Variant Type Consequence IARC Sex Age at diagnosis Personal history (age) Familial history (cases)

BRCA1

NM_007294

c.5468-1G > A p.(?) SNV Splicing C5 F 69

breast

(42, 55)

pancreas (1), breast (1), uterus (1)

BRCA2

NM_000059

c.6039del p.(Val2014TyrfsTer26) del Frameshift C5 M 63 none breast (1), stomach (1), lung (1), brain (1)

BRCA2

NM_000059

c.8364G > A c.8364G > A SNV Missense C5 M 72 none NA

BRCA2

NM_000059

c.1532_133insT (p.Pro512ThrfsTer2) ins Frameshift C5 M 61 none lung (1), prostate (1)

ATM

NM_000051

c.3275C > A p.(Ser1092*) SNV Nonsense C5 M 44 NA NA

ATM

NM_000051

c.4236 + 2 T > A p.(?) SNV Splicing C4 F 56 none none

PALB2

NM_024675

c.2167_2168del p.(Met723Valfs*21) del Frameshift C5 F 44 none breast (1), colon (1), head and neck (1)

RAD50

NM_005732

c.1636-1G > A p.? SNV Splicing C4 M 53 none none

M Male, F Female, IARC International Agency for Research on Cancer classification (C5: pathogenic; C4: likely pathogenic), SNV Single Nucleotide Variation, NA Not available