Table 3.
Candidate genes within the genomic region spanning the single bin
| QTL | Chr | Bin | Bin length (bp) | ID | Positiona | Annotationb |
|---|---|---|---|---|---|---|
| qHL-1-1 | 1 | PZE-101160628 | 548,905 | GRMZM2G106928 | 203,625,515..203631858 | Copper/zinc superoxide dismutase 2 |
| qHN-1-1 | 1 | PZE-101021308 | 2,719,182 | GRMZM2G162749 | 14,848,652..14854535 | Cycling DOF factor 1 |
| GRMZM2G034302 | 15,067,584..15075973 | Sucrose transporter 2 | ||||
| qHN-1-2 | 1 | SYN9147 | 2,128,406 | GRMZM2G032339 | 277,216,651..277300425 | K-box region and MADS-box transcription factor family protein |
| GRMZM5G826714 | 277,445,149..277451612 | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family | ||||
| qHW-3-1 | 3 | PZE-103154161 | 1,040,297 | GRMZM2G037650 | 207,219,415..207228119 | Myb domain protein 42 |
aGene position according to the B73 reference sequence (V2); bGene annotated according to their homologous gene in Arabidopsis thaliana or rice