Kinetics of anchoring reactions involving dipeptido dinucleotides 4–9, primer 2g, and different RNA templates, as obtained from fitsa,b.
| Template | Peptido dinucleotide | k (h−1) | t 1/2 (h) | y max (%) |
|---|---|---|---|---|
| 1cuuc | 4 | 0.39 ± 0.03 | 1.8 | 93 ± 3 |
| 1cuuc | 5 | 0.24 ± 0.02 | 2.9 | 80 ± 1 |
| 1cuuc | 6 | 0.91 ± 0.06 | 0.76 | 86 ± 2 |
| 1cguu | 7 | 0.031 ± 0.005 | 22 | 30 ± 2 |
| 1cguu | 8 | 0.087 ± 0.007 | 8.0 | 48 ± 1 |
| 1cguu | 9 | 0.087 ± 0.003 | 8.0 | 50 ± 0.4 |
Fits to: y = ymax (1 − e−kt), where y is the yield, k is the rate constant, and t1/2 is the half-life time for formation of the POR. Error values are those obtained by fitting with OriginPro, version 8. See Fig. S17–S36 of the ESI for spectra and kinetic plots.
Conditions: 20 μM DNA primer, 20 μM template, 200 μM dipeptido dinucleotide, 50 mM MOPS buffer, pH 7.4, 0.2 M EDC, 0.2 M NaCl at 0 °C.