Table 1.
Genes in the pathway of the TCA cycle.
Gene | Definition | FC (C/B) | |Log2 (FC)| |
---|---|---|---|
4.1.1.49 | Phosphate carboxykinase (ATP) | 0.126 | 2.989 |
1.2.4.1 | Pyruvate dehydrogenase E1 component | 0.139 | 2.847 |
2.3.2.12 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) | 0.189 | 2.404 |
1.8.1.4 | Dihydrolipoamide dehydrogenase | 0.126 | 2.989 |
6.4.1.1 | Pyruvate carboxylase | 0.069 | 3.857 |
2.3.3.1 | Citrate synthase | 0.071 | 3.816 |
2.3.3.8 | ATP citrate (pro-S)-lyase | 0.086 | 3.540 |
4.2.1.3 | Aconitate hydratase | 0.187 | 2.419 |
1.1.1.41 | Isocitrate dehydrogenase (NAD+) | - | - |
1.1.1.42 | Isocitrate dehydrogenase | - | - |
1.2.4.2 | 2-Oxoglutarate dehydrogenase E1 component | 0.105 | 3.252 |
2.3.1.61 | 2-Oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) | 0.154 | 2.699 |
4.2.1.2 | Fumarate hydratase, class I | 0.144 | 2.786 |
1.3.5.1 | Succinate dehydrogenase (ubiquinone) flavoprotein subunit | 0.149 | 2.796 |
6.2.1.4 | Succinyl-CoA synthetase alpha subunit | 0.119 | 3.071 |
6.2.1.5 | Succinyl-CoA synthetase alpha subunit | 0.119 | 3.071 |
Genes marked with blue and red borders in Figure 1 are those whose expression levels have changed. FC(C/B) denotes the differential expression of this UniGene between two samples, and B is the control group. Log2FC is the fold change value of the expression difference between the two groups. The smaller the FC value and the larger the |Log2(FC)| value, the more obvious the gene downregulation. The genes marked in red are those verified by qPCR.