Table 1. N. stella and B. argentea differential expression of genes under different oxygen regimes.
The LFC and contrast measured by the adjusted P-value column is relative to the average expression measured in shipboard samples.
Log2 fold change | ||||||||
Species | Function | Cluster ID | Aerated | Anoxia | Euxinia* | Hypoxia | F | adj. P value |
N. stella | GOGAT | cluster1117 | −0.4367 | −0.5743 | −0.6865 | −0.7007 | 1.2547 | 0.5730 |
GS | cluster4836 | 0.2264 | −0.1444 | −0.1995 | 0.1155 | 8.8760 | 0.0074 | |
GDH | cluster34930 | −1.2481 | 1.1875 | −0.3173 | 0.5969 | 2.3672 | 0.3019 | |
NNP | cluster13217 | −0.5558 | −0.4574 | −0.5353 | −0.3803 | 4.6982 | 0.0767 | |
NRT | cluster59869 | −0.2604 | 0.0560 | 0.1280 | 0.0966 | 0.7199 | 0.7305 | |
pNR | cluster2582 | −0.7519 | −0.8590 | −0.9094 | −0.8817 | 10.5389 | 0.0031 | |
NirK | cluster5632 | −0.5266 | −0.4489 | −0.4856 | −0.2735 | 2.8022 | 0.2331 | |
Nor | cluster57 | 0.0846 | −0.3545 | 0.0146 | −0.5278 | 0.0171 | 0.9996 | |
Fe- hydrogenase |
cluster29558 | −0.3659 | −0.1945 | −0.1799 | −0.3101 | 3.6352 | 0.1416 | |
PFOR | cluster19494 | −0.6734 | −0.9089 | −0.8033 | −0.7772 | 7.1177 | 0.0194 | |
B. argentea | GS | cluster3668 | 0.0893 | −0.2108 | −0.0368 | −0.0995 | 0.0933 | 0.9932 |
GOGAT | cluster26749 | −0.1613 | −0.7319 | −0.3561 | 0.4707 | 0.7182 | 0.8659 | |
GDH | cluster206540 | −0.0676 | −0.0506 | 0.0663 | −0.0226 | 0.0834 | 0.9944 | |
NNP | cluster8555 | 0.2403 | −0.0257 | 0.0963 | 0.0842 | 0.2636 | 0.9685 | |
NRT | cluster56220 | 0.0683 | 0.0299 | 0.0575 | 0.2098 | 0.2232 | 0.9752 | |
NR1 | cluster15120 | 0.1696 | −0.1215 | −0.0347 | −0.2080 | 0.4289 | 0.9318 | |
NR2 | cluster1205 | 0.3489 | −0.0570 | 0.0545 | −0.0624 | 0.3382 | 0.9527 | |
NirK | cluster31395 | 0.2702 | 0.3059 | 0.3624 | 0.4285 | 0.8967 | 0.8306 | |
Nor | cluster249 | −0.0872 | −0.1105 | −0.0615 | −0.1459 | 0.0684 | 0.9960 | |
Fe- hydrogenase |
cluster62445 | 0.0012 | 0.1086 | 0.0971 | 0.0641 | 0.0535 | 0.9975 | |
PFOR | cluster155620 | 0.5332 | 0.4299 | 0.7357 | 0.6177 | 1.7946 | 0.6290 |
*Euxinia = anoxia + sulfide.