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. 2021 Apr 13;6(16):10506–10514. doi: 10.1021/acsomega.0c03262

Table 1. MS-Identified 2D Gel Protein Spots.

  a     b     pI
approx. MW (KDa)
         
Sr., No. protein name/ID accession number spot number fold changeb p-value FDR observed database observed database mascot score sequence coverage (%) mass values searched mass values matched PMF score
1 vimentin/VIM P08670 C12/T12 1.51 0.005 0.04 5.12–5.63 5.06 51–54 53.61 73 24 62 11 100.6
2 tubulin beta 2Cchain/TBB2C P68371 C13/T13 2.50 0.001 0.03 4.63–4.94 4.79 50 50.25 58 40 127 19 145
3 tubulin betachain/TBB5 P07437 C14/T14 –1.13 0.42 0.44 4.47–4.83 4.78 45–49 49.63 90 33 68 11 122
4 tubulin alpha 1Cchain/TBA1C Q9BQE3 C15/T15 1.54 0.015 0.05 4.87–5.21 4.96 33–36 49.86 76 31 55 9 121
5 actin, cytoplasmic 1/ACTB P60709 C16/T16 1.57 0.032 0.06 5.1–5.4 5.29 41–45 41.71 157 46 113 12 89.9
6 actin, cytoplasmic 2/ACTG P63261 C17/T17 1.50 0.014 0.05 5.0–5.5 5.31 43 42.10 76 58 154 17 85.4
7 galectin-1/LGALS1 P09382 C18/T18 1.43 0.034 0.06 5.1–5.3 5.34 8–12 15.04 63 51 74 6 35.8
8 endoplasmin/ENPL P14625 C19/T19 1.55 0.069 0.10 4.6–4.9 4.76 76–80 92.41 64 33 176 27 135.8
9 retinol-binding protein 1/RBP1 P09455 C20/T20 2.02 0.041 0.07 4.9 4.99 14–16 16.01 62 51 38 8 109
10 albumin, partial/AEE F6KPG5 C21/T21 –1.72 0.024 0.06 6.7–7.1 5.73 66–71 66.48 72 33 64 16 100.3
11 alloalbumin venezia/AAA P02768 C22/T22 1.52 0.012 0.05 6.6–6.9 5.99 71 71.17 124 32 74 20 89.7
12 serum albumin/ALBU P02768 C23/T23 –1.55 0.033 0.06 6.4–6.8 5.92 71 71.31 68 22 75 15 65.6
13 apolipoprotein A-I/APOA1 P02647 C24/T24 –1.74 0.014 0.05 4.3–5.2 5.56 27–32 30.75 77 47% 132 13 94.2
14 collagen alpha 2(VI) chain/COL6A2 P12110 C25/T25 1.56 0.013 0.05 5.6–5.9 5.85 120 108 180 13 41 13 149
15 ATP synthase subunit beta, mitochondrial/ATPB P06576 C26/T26 2.23 0.034 0.06 4.8–5.1 5.26 45–50 56.52 100 58 160 25 178
16 prohibitin/PHB P35232 C27/T27 1.26 0.287 0.33 6.2–6.4 5.57 17–20 29.78 62 33 27 6 72
17 phosphatidylethanolamine-binding protein 1/ PEBP1 P30086 C28/T28 –1.29 0.239 0.28 7.1 7.01 17 21.15 61 40 109 8 55
18 keratin 1/K1 H6VRF9 C29/T29 1.42 0.12 0.16 7.2–7.8 7.60 53 66.02 74 25 50 9 84.5
19 keratin, type II cytoskeletal 2 epidermal/K22E P35908 C30/T30 –1.31 0.14 0.19 8.8 8.07 52–54 65.39 58 22 53 9 81
20 keratin, type I cytoskeletal 9/K1C9 P35527 C31/T31 1.85 0.14 0.18 5.6 5.14 57–62 62.02 69 25 100 13 98
a

Six proteins with fold change ≥1.5, FDR ≤ 0.05, and PMF score >79 are shown in bold.

b

“–” sign denotes downregulated expression in OC.