Table 2. First 20 Sequences from Deep Sequencing of the Counter-SELEX.
library:
ATACCAGCTTATTCAATT-N52-AGATAGTAAGTGCAATCT | |||
---|---|---|---|
cell-SELEX oligomer name | sequence | count per million | cell-SELEX ranka |
#AP-Cntr 1 | -CGAGACCACCAACCGAACCAAACCACACGAGTCAAAACCCACGGAACGAACG- | 6856 | 4 |
#AP-Cntr 2 | -GGGACAAGACAACGAACGAACAGGAAGAGAACCGGAATGCAGACGTCAGGGG- | 6768 | 6 |
#AP-Cntr 3 | -CGACAAAAAAACGAACAACCAGAACCGGAAGATAGAGGAAAGAGCGCGACGG- | 4672 | 9 |
#AP-Cntr 4 | -CGAACAAGGAACGAAAACCGAACGGGAAAGGACCGCGACAAGAGATTACGGG- | 3013 | 8 |
#AP-Cntr 5 | -CCTCCTGAACACATTACATTGTATAAACTGAGCTGAATTGTATCATGAAGGG- | 2805 | NDb |
#AP-Cntr 6 | -CGGACGGAACAACAAACGGGACTGGAACAGGAAGAAAAAGACGGAGGACGAC- | 2772 | 14 |
#AP-Cntr 7 | -CCGGGAAAACAGGAACGACAAGAGAAAGACCAACACAGACGACAAAGTGGGA- | 2467 | 12 |
#AP-Cntr 8 | -GGAATTCATCTTGTTCACGGGGAAGTTGATAATGGGAGGTGTGTTAAACAGG- | 2175 | NDb |
#AP-Cntr 9 | -CGAACAGGAACAACAGAAAGACACCCAGAGGAACCGGAGGAAGACGCACTGA- | 1998 | 16 |
#AP-Cntr 10 | -CACGCCAAGAAGGGGAACACGGTTCGCACGGAGGAAGACTAAAAGAATATCG- | 1827 | NDb |
#AP-Cntr 11 | -CGAAACGCACGGAACAAACAGACAAAGAACCAACAGAAACGGAGTAAACGGG- | 1672 | 17 |
#AP-Cntr 12 | -CGAAACAGCCCGGAACAGATTCAATTCGAGGCACGCCAGCAGGAAACGACAC- | 1576 | NDb |
#AP-Cntr 13 | -GGGACAATAAACGGGTACTGGACAAAACGAAAGGGACAGACGAAGGAAGCGG- | 1432 | 24 |
#AP-Cntr 14 | -CCGAATTCAGGAAAGGGTTTAAATCGAAAGCCCGCATCGAAAGATTAACGAC- | 1395 | NDb |
#AP-Cntr 15 | -CGAAAACACACCCGGAAAAACGAACGGAAGCGGGAATACAACAAACCGGAAT- | 1253 | NDb |
#AP-Cntr 16 | -CACACGACCCAATAAAAGGAAGAACAAGAGAAGAGAAACAGGAGCCGACGAC- | 1169 | 26 |
#AP-Cntr 17 | -CGACAAAACAAGGGGAACACACGGAAAGACCAGAAAACGGGGTAGGACGTAG- | 1099 | 29 |
#AP-Cntr 18 | -CGGACAAAGGGAAGACGAACCACGACAAACAGGGACAAGAATATAGTGATGG- | 924 | 33 |
#AP-Cntr 19 | -CATAGACACGGAACACACAGAACGGAAATAAAGGCTGCGAAGATCGGGATGG- | 888 | 34 |
#AP-Cntr 20 | -CGGGACAAGACAACGAACGAACAGGAAGAGAACCGGAATGCAGACGTCAGGG- | 882 | 64 |
Cell-SELEX rank indicates the frequency rank of each detected sequence in the enriched pool of the Cell-SELEX experiment.
ND refers to each sequence that is not detected in the enriched pool of the Cell-SELEX experiment.