Table 3. Docking Enrichment Comparison Using Different Scoring Functions. Metrics of DSXPDB scores post PLIF-M3 filtration and Goldscore with no PLIF filtration are shown in bold for comparison.
GoldScore |
ChemPLP |
ChemScore |
DSXPDB |
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
(re)scoring method/PLIF | AUROC | EF1% | EF5% | AUROC | EF1% | EF5% | AUROC | EF1% | EF5% | AUROC | EF1% | EF5% |
none | 0.79 | 4.64 | 3.97 | 0.86 | 9.28 | 6.96 | 0.79 | 9.28 | 4.97 | 0.81 | 9.28 | 3.97 |
PLIF-M1 | 0.74 | 8.26 | 4.91 | 0.83 | 8.26 | 5.90 | 0.78 | 8.26 | 5.90 | 0.84 | 8.26 | 7.86 |
PLIF-M2 | 0.76 | 8.80 | 6.09 | 0.75 | 4.40 | 5.08 | 0.77 | 4.40 | 5.08 | 0.86 | 8.80 | 8.12 |
PLIF-M3 | 0.77 | 4.88 | 4.88 | 0.80 | 4.88 | 4.88 | 0.79 | 4.88 | 6.83 | 0.86 | 9.76 | 6.83 |
PLIF-M4 | 0.76 | 8.77 | 6.07 | 0.74 | 4.38 | 5.06 | 0.77 | 4.38 | 6.07 | 0.86 | 8.77 | 8.09 |