Table 1. Initial Configurations of Rac1-GTP and Rac1-GDP Systemsa.
simulation system | protein | GDP/GTP | mutation | PDB |
---|---|---|---|---|
system 1 | Rac1 | GTP | wild type | 3TH5 |
system 2 | Rac1 | GDP | wild type | 5N6O |
system 3 | Rac1 | GTP | P29S | 3SBE |
system 4 | Rac1 | GDP | P29S | 5N6O* |
system 5 | Rac1 | GTP | A159V | 3TH5* |
PDBs with asterisks are modified with in silico mutagenesis.