Table 2.

Difference in microbiome composition between stroke patients and healthy controls (Genus level).

Taxon	Occupancy		Fold change
	Healthy control	Stroke	control vs stroke
Bacteroides	0.13819 ± 0.0042	0.06164 ± 0.0051	0.4↓
Akkermansia	0.14117 ± 0.0045	0.01080 ± 0.0016	0.1↓
Clostridiales(o)	0.12330 ± 0.0039	0.01943 ± 0.0018	0.2↓
Ruminococcaceae(f)	0.06609 ± 0.0027	0.05415 ± 0.0035	0.8↓
Enterobacteriaceae(f)	0.02437 ± 0.0016	0.07085 ± 0.0070	2.9↑
Pseudomonas	0.02256 ± 0.0041	0.05737 ± 0.0048	2.5↑
Flavobacterium	0.00087 ± 0.0003	0.05982 ± 0.0055	68.6↑
Staphylococcus	0.02129 ± 0.0016	0.02957 ± 0.0036	1.4↑
Prevotella	0.00686 ± 0.0015	0.03713 ± 0.0036	5.4↑
Micrococcus	0.00197 ± 0.0003	0.03889 ± 0.0032	19.8↑
Lachnospiraceae(f)	0.01973 ± 0.0016	0.01421 ± 0.0011	0.7↓
Lactobacillus	0.02594 ± 0.0009	0.00436 ± 0.0013	0.2↓
Corynebacterium	0.00770 ± 0.0004	0.02217 ± 0.0024	2.9↑
Enhydrobacter	0.00259 ± 0.0031	0.02457 ± 0.0024	9.5↑
Ruminococcus	0.01811 ± 0.0013	0.00702 ± 0.0009	0.4↓
Parabacteroides	0.01172 ± 0.0009	0.00705 ± 0.0009	0.6↓
Comamonadaceae(f)	0.00709 ± 0.0013	0.01132 ± 0.0017	1.6↑
[Ruminococcus]	0.01370 ± 0.0008	0.00453 ± 0.0006	0.3↓
Oscillospira	0.01232 ± 0.0006	0.00413 ± 0.0006	0.3↓
Collinsella	0.00310 ± 0.0004	0.00995 ± 0.0014	3.2↑
Faecalibacterium	0.00283 ± 0.0019	0.00961 ± 0.0010	3.4↑
Blautia	0.00384 ± 0.0007	0.00639 ± 0.0009	1.7↑
Lachnospiraceae(f)	0.00629 ± 0.0010	0.00360 ± 0.0005	0.6↓
Mucispirillum	0.00970 ± 0.0011	0.00013 ± 0.0001	0.0↓
Actinomyces	0.00709 ± 0.0004	0.00257 ± 0.0005	0.4↓
Anaerococcus	0.00101 ± 0.0002	0.00756 ± 0.0017	7.5↑
Finegoldia	0.00043 ± 0.0004	0.00810 ± 0.0018	18.9↑
Dialister	0.00215 ± 0.0005	0.00604 ± 0.0009	2.8↑
Klebsiella	0.00571 ± 0.0008	0.00215 ± 0.0004	0.4↓
Stenotrophomonas	0.00599 ± 0.0001	0.00118 ± 0.0005	0.2↓
Neisseriaceae(f)	0.00049 ± 0.0000	0.00662 ± 0.0009	13.5↑
ZB2(c)	0.00006 ± 0.0003	0.00691 ± 0.0008	108.7↑
rc4-4	0.00547 ± 0.0000	0.00033 ± 0.0002	0.1↓
Aerococcaceae(f)	0.00001 ± 0.0000	0.00559 ± 0.0015	448.4↑
TM7-1(c)	0.00007 ± 0.0000	0.00522 ± 0.0009	73.5↑